Gene Shel_05470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05470 
Symbol 
ID8394439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp631951 
End bp632811 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content61% 
IMG OID644985309 
ProductrRNA methylase 
Protein accessionYP_003142955 
Protein GI257063283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTTG TCGAGGTAGA AACGTTGGAC GACCCTCGGT TGGACGCCTA TGCGCGTTTG 
ACCGAGGCGC AGCTGCGCAA CAAGCTGGAA CCTGAAAAAG GCATCTTCAT CGCTGAAAGC
CTCAAGGTCA TCGACCGGGC ACTTGCGGGC GGTATGGTGC CCCTGTCTGT GCTGATGACG
CCCGAGTGGA TGGACGCCGC CGCCGACATG CTCGAACGTA TCCAGCAGGC GGGGGAGGGC
GGCGCCGACG TACCTATATA TGTAGGGCCT GCCGATGAAC TGCAGAAACT GACTGGCTTC
AAGCTGACTC GGGGTATTCT GTGCGCCATG CGGCGTCCGA AGATGCCGAG TGCCGAAGAC
CTGCTTGCCA CCTGCAGAAA CGGAGGACCG GCCCGTCGGG TGGCGGTGCT GGAAGGCATC
GTCGACCACA CGAATGTCGG AGCCATTTTC CGTTCGGCGG CCGCGCTCAA CGTGGATGCG
GTTTTGGTCA CGCCGACGTG TTGCGACCCG CTTTATCGTC GTGCCGTGCG CGTTTCCATG
GGTACTGTGT TTCAGGTGCC ATGGACCCGT TTGGGTGAAG ATGTGCACGA TTGGCCTGGT
CAGGGACTTG AACGGCTGCA TGCTTTGGGG TTCAAGACGG CTGCCATGGC CCTGTCCGAC
GATTCCGTAT CCTTGGGAGA TCCCACCTTG GCTGCCGAGG AGAAGCTGGC ATTGGTATTC
GGGACCGAAG GGGACGGGTT GAGTCCTCGC ACGATTGCGA CCTGCGATTA TACGGTCCGC
ATTCCGATGT CGCATGGTGT GGACAGCCTC AATGTGGCTG CCGCCAGCGC TGTGGCGTTC
TGGGAACTCT GCGCACGGTA A
 
Protein sequence
MSFVEVETLD DPRLDAYARL TEAQLRNKLE PEKGIFIAES LKVIDRALAG GMVPLSVLMT 
PEWMDAAADM LERIQQAGEG GADVPIYVGP ADELQKLTGF KLTRGILCAM RRPKMPSAED
LLATCRNGGP ARRVAVLEGI VDHTNVGAIF RSAAALNVDA VLVTPTCCDP LYRRAVRVSM
GTVFQVPWTR LGEDVHDWPG QGLERLHALG FKTAAMALSD DSVSLGDPTL AAEEKLALVF
GTEGDGLSPR TIATCDYTVR IPMSHGVDSL NVAAASAVAF WELCAR