Gene Shel_05420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05420 
Symbol 
ID8394434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp627026 
End bp627664 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content62% 
IMG OID644985304 
ProductMAF protein 
Protein accessionYP_003142950 
Protein GI257063278 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0424] Nucleotide-binding protein implicated in inhibition of septum formation 
TIGRFAM ID[TIGR00172] MAF protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.417777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAGA GTTTCGATAT CTTTCTGGCA AGCGGCAGCC CGCGCCGCCG CGAGCTTCTG 
ACGCGCGAGG GCGTGGACTT CTCGGTCCGC ACTGCCGAGG TTGACGAGTA TTTGACCATC
GACGAGCGTC GCGATCCTGA ACAGGCTGCA AAGTCGTTGG CCGAACGCAA GGCCCGCGCA
TCGGTGGAAG CCCTGCTCAA CCAGGACGGA TACACCGGCA TGGCGGCGGT CATCGCGGCG
GACACCATGG TGGTGCTCGA CGGCGAAATT TACGGCAAGC CTGTCGACGA AGACGACGCC
ATGCGTATGC TGGGCGAGCT GTCCGGACGA ACGCACCAGG TCATTACGGG CGTTTCGGTG
TGGCTGATGC ATGCGCCGGC AGATAATCCC GAGGAGCTGT CGCTGGGCTT CCGCAGTTTC
GCCGAAACGA GCCACGTGCG TTTCAAAGAC CTGGACGAAG GGATTATCGC TTGGTACGTG
GGTACGGGCG AGCCCATGGA CAAGGCGGGT GCCTACGGCA TCCAAGGTCT CGGCGGCGAT
TTGGTGGCCG ATGTCCGCGG CGACTTCGAC AACGTGGTCG GCCTGCCGGT AAAACGGCTG
GTGGCGGACT TCGCCGACGT GTTCGGATTG GAGGAATAA
 
Protein sequence
MAQSFDIFLA SGSPRRRELL TREGVDFSVR TAEVDEYLTI DERRDPEQAA KSLAERKARA 
SVEALLNQDG YTGMAAVIAA DTMVVLDGEI YGKPVDEDDA MRMLGELSGR THQVITGVSV
WLMHAPADNP EELSLGFRSF AETSHVRFKD LDEGIIAWYV GTGEPMDKAG AYGIQGLGGD
LVADVRGDFD NVVGLPVKRL VADFADVFGL EE