Gene Shel_05360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05360 
Symbol 
ID8394428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp621016 
End bp622074 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content55% 
IMG OID644985298 
Producthypothetical protein 
Protein accessionYP_003142944 
Protein GI257063272 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTAG ATGTGTACCA TACCGCTCTA GATGTGTATC GAGCCAATCG CTTCGCGACG 
TTCGATGCGC CGCTGCATGG CCGCGAGGCC CGCCTCCTCA TGAAGGATAT CAACGCACAC
GCAACGCTGT CCGAACTGTC GGATGTCAAC CTTGCCAGAC ACAATGCCAT CTGTGATTTC
CCCAACACGA CCGTCCTTGT CACGGATGAA TCTGCCATAC GCAAAAGCGA CGATTTCAAA
TATCGTCTTT GGACAGGAGA AATCACAGGA GACATGATCC GCATTGTAGA CAATGACCTC
TGCATTCCTA CGCCCGAGTT CCTTTATCTG CTATATGCGC TGAAGCTTCC CGAAGCAAAA
CTTGTTGAGC TTGGCATGGA ATTGTGCGGG TCGTACACTG TTGGCCCATA CTATTTTCCC
AACGGACCCA GGCCCGCCCC GCTGACAACA CCCGCCAAGA TCGAGGCGTT CATCAAGCGA
TTCCCGGGCA CAAGAGGAAG TACCAGGGCC ATGCATGCCC TGAAGTTCGT AGTTAAGAAC
TCCTGGTCAC CCATGGAAAC CAAAGTCATA ATCATCGTTT GCCTTCCGGT CAGAATGGGA
GGCTACGGCG CACCCATCCC GGTGTGCAAC AAATGGTTTG GCCTGAGCGA GTCGGAGCGG
CCCTACGACG GACGCACCGG ATTCGACGGG GACATCGTAT GGGAGCGGAC TTTGCCGGAT
GGCACCAAAA TCATTGCCAT CTGGGAGTTT GACGGCGGAC AGCACTTCAC GAAAGATGCC
AGCATCCGCG ACGGACGAAA AGACAGAATT CTCACCTCCA AGGGATGCAT CGTGCAGCGA
GTCACCTCAG CAGACGTGTA CAACCGAAAG GCAATGGACC TTGCAGCGCG GGATCTTTTC
AACGCCCTGC AGCTAAGAAA GCGTACACCA TCCCACGCGT CCTTGATGAT GCGCGACGAC
CTGCGCGAGC TCATCCTCCC AAAACAGGAG TTTGTCCATC CGGACCTCTT GACTCCGGGC
TCGTTCCCCT TGTATCAGGC ACCCTCGTTC GTCATATGA
 
Protein sequence
MRLDVYHTAL DVYRANRFAT FDAPLHGREA RLLMKDINAH ATLSELSDVN LARHNAICDF 
PNTTVLVTDE SAIRKSDDFK YRLWTGEITG DMIRIVDNDL CIPTPEFLYL LYALKLPEAK
LVELGMELCG SYTVGPYYFP NGPRPAPLTT PAKIEAFIKR FPGTRGSTRA MHALKFVVKN
SWSPMETKVI IIVCLPVRMG GYGAPIPVCN KWFGLSESER PYDGRTGFDG DIVWERTLPD
GTKIIAIWEF DGGQHFTKDA SIRDGRKDRI LTSKGCIVQR VTSADVYNRK AMDLAARDLF
NALQLRKRTP SHASLMMRDD LRELILPKQE FVHPDLLTPG SFPLYQAPSF VI