Gene Shel_05330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05330 
Symbol 
ID8394425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp617814 
End bp618245 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content55% 
IMG OID644985295 
Productpredicted acyltransferase 
Protein accessionYP_003142941 
Protein GI257063269 
COG category[R] General function prediction only 
COG ID[COG2153] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGG TTTCGAAGTA CTTCAACGAG CTCACAACGA CGGAACTCTA CGAGATTCTG 
AAGGCTCGCG TGGCCGTGTT CGTCGTGGAG CAGACCTGCC CTTATCAGGA GGTCGACGGC
AACGATTACG ATAGCCTGCA TGTGTTTTAT GAAGAAGAAG GCCAGGTCAA AGCCTATCTC
AGGTCGTTTT TCATTTCGGA CGACGTCGTG CAGATGGGCC GTGTGCTGAC AATCGACCGC
GGTACGGGGC TTGGCGGCAG GCTTCTGCGG GAAGGCATCG AGCAGATTCG CGAGAAGCAG
CATCCGCGGC GAATCTACAT CGAGGCCCAG CGCTACGCGA CGGGATACTA CGAGCGGGAA
GGGTTCGAAA TCTGCTCGGA GGAGTTTCTC GAAGACGGCA TTCCCCATGT CCAGATGATA
TTGGATTTGT AA
 
Protein sequence
MELVSKYFNE LTTTELYEIL KARVAVFVVE QTCPYQEVDG NDYDSLHVFY EEEGQVKAYL 
RSFFISDDVV QMGRVLTIDR GTGLGGRLLR EGIEQIREKQ HPRRIYIEAQ RYATGYYERE
GFEICSEEFL EDGIPHVQMI LDL