Gene Shel_05290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_05290 
Symbol 
ID8394421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp614948 
End bp615574 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content57% 
IMG OID644985291 
Producthypothetical protein 
Protein accessionYP_003142937 
Protein GI257063265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACG GTTTGATTGG GTCGTTGGTT CCGATGCTGT TCGACAGGAC GGCCTACGGC 
TACACGCAGC GTGTGCTTCC GGAACTCGAC ATGAAGGCGT TCAAACGGGC GCATCATCAG
GAGTATCGCG AAATGGTCGA ACGGACGCCG GGCGTGGGCT CGATGAAGGA CAATATGTTT
GCCATGGTGA TGTACATGGC GTGCTACGGA TTCAGCTATT ACAAAGCCTC GCCCGACGTC
ATGACGCTGG AAATCTTCGA CGGCATGATC GATGCGCTCT GCACCAGCGA CATCATGAAG
CGGGCGTACA AGAACAAGGA CTGTTTCGAC CAGAAGGAAA TCGACAAGTA CTTGCGCGGC
GCGGCTCGGT CGCAAAAGCG GGAATACCCG ATGGACTGGG TGTTCGACTT CTCGTACGAC
CTGTCGGTGC CGGAGTATTT CGTGACGCAT CGCGAATGCG GCATCTGCAA AATCGCGCAG
CAGGAGAACA TGACGTTCCT GACGCCGCAC ATGTGCGTGA TGGACTATCC GACCATCGAG
TACAAAGGCG GCCGCCTCAT CCGGACGAAA ACCCTGGGGC AGGGCGACGA CTGCTGCGAC
TTCCACGTGG TGCGCAAAGC AGATTAG
 
Protein sequence
MKYGLIGSLV PMLFDRTAYG YTQRVLPELD MKAFKRAHHQ EYREMVERTP GVGSMKDNMF 
AMVMYMACYG FSYYKASPDV MTLEIFDGMI DALCTSDIMK RAYKNKDCFD QKEIDKYLRG
AARSQKREYP MDWVFDFSYD LSVPEYFVTH RECGICKIAQ QENMTFLTPH MCVMDYPTIE
YKGGRLIRTK TLGQGDDCCD FHVVRKAD