| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05230 |
|---|
| Symbol | |
|---|
| ID | 8394415 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 610190 |
|---|
| End bp | 611065 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644985285 |
|---|
| Product | predicted permease, DMT superfamily |
|---|
| Protein accession | YP_003142931 |
|---|
| Protein GI | 257063259 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.927028 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTT TGGACAAGAA AGCCCTCGTC AAGTACCTGT GCGCCCTTCT GCTGTTCGGT
TCCAACGGCG TCGTGGCCAG CCGTATCGCA ATGGGCAGCC ACGAGATAGT CTTCCTGCGA
ACGCTCATCG GCAGCGTGTT CCTGATTGCC GTGTTCCTTC TGGGCAAGGG CACCTTCCAT
ATTCGGGAAT ACAAGCGGGA CGCCCTGTTC ATCGTGCTGT CAGGCGCCGC CATGGGCCTG
AGCTGGCTAT TCGTGTTCGA GGCGTATCGC CTGATCGGCG TTGGGTTCAG CACGCTGCTT
TACTATTGCG GTCCGGTCAT CGTGATGATC CTTTCGCCGG TCATCTTCAG AGAGAGACTT
ACGAAGCCGA AGGTCGTCGG GTTCGTCATC GTGCTGGTTG GCCTGGTGCT CGTAAACGGA
AAACTGGTCG GGACGGGCAA TGTCTGGGGG CTGTTCTGCG GCGCCATGTC CGCGGTCATG
CTGTTCCTCC TTATCACGTT CAACAAGCAG AGCACGCACA TCGTGGGGAT GGAGAATTCG
GTCATCCAGC TGACGGCGAG TTTTCTGACC GTGGCGGTGT TCGTGTGGGC CAAACAGGGC
TTCGCCTTGG ACGTACCTGC CGGATCGTGG CTCTGGGTTT TGATGTTGGG CCTGGTCAAC
ACAGGGCTCG GATGCTATCT GTACTTTTCG GCGCTGTCGA AGCTGCCGGT GCAGACGGTG
GCGGTGTGCG GCTATCTGGA GCCGCTGTCG GCAGTGGTGT TCTCGGCGGT GCTTTTGGGC
GAGCGCATGA CCCCGTTGCA GGTGGTCGGC GCGGTCTGCA TCATCGGCGG CGCCATGATC
GGCGAGCTGG TGAAAGAGCG GGCGAAACGA CCGTAG
|
|---|
| Protein sequence | MDRLDKKALV KYLCALLLFG SNGVVASRIA MGSHEIVFLR TLIGSVFLIA VFLLGKGTFH
IREYKRDALF IVLSGAAMGL SWLFVFEAYR LIGVGFSTLL YYCGPVIVMI LSPVIFRERL
TKPKVVGFVI VLVGLVLVNG KLVGTGNVWG LFCGAMSAVM LFLLITFNKQ STHIVGMENS
VIQLTASFLT VAVFVWAKQG FALDVPAGSW LWVLMLGLVN TGLGCYLYFS ALSKLPVQTV
AVCGYLEPLS AVVFSAVLLG ERMTPLQVVG AVCIIGGAMI GELVKERAKR P
|
|---|
| |