Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_05100 |
Symbol | |
ID | 8394402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 599130 |
End bp | 599585 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985273 |
Product | protein-tyrosine-phosphatase |
Protein accession | YP_003142919 |
Protein GI | 257063247 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA TCCTGTTCGT GTGCCACGGC AACATCTGCC GGTCGACGAT GGCCCAGTAC GTTTTGCAGG ATATGGTGGA CAAACGCGGT CTGACCTCGC AGTTCGCCAT CGATTCCGCA GCCTGCCGCA ACGACGAGAT AGGCTCGCCC GTGGACCCGC GCACCCGCCG CATGCTGGAA TCGCAAGGCG TGCCCTGCGG CAACCATATC GCCCGCCGCC TGCGCCGCGA CGAGGCCGCC GACTGGGACA TGGTCGTCGG GATGGACGGC GAGAACATGC GCGACTTGAA GCGCCAGCTT CCTTCCGACG CTCAGGCGAA GTGCTTCAAG CTTATGGAAT TCGCAGGTCA GAGCCGCGAT GTGGCCGATC CTTGGTATAC GCTGAACTTC GACGAAACCT ACGACGACGT AGTCGCCGGC TGCCAGGGCC TGCTGTCCTA CCTGGGGATC AAGTAG
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Protein sequence | MIRILFVCHG NICRSTMAQY VLQDMVDKRG LTSQFAIDSA ACRNDEIGSP VDPRTRRMLE SQGVPCGNHI ARRLRRDEAA DWDMVVGMDG ENMRDLKRQL PSDAQAKCFK LMEFAGQSRD VADPWYTLNF DETYDDVVAG CQGLLSYLGI K
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