| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_05080 |
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| Symbol | |
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| ID | 8394400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 595850 |
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| End bp | 598423 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985271 |
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| Product | anaerobic dehydrogenase, typically selenocysteine-containing |
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| Protein accession | YP_003142917 |
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| Protein GI | 257063245 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATA CTGCAATACC TCAGCGCGCT GTTTCCAGGC GCTCGTTCAT GAAGGGCTCT
GCAGCGACGG TCGCACTCGC TGGTTTGGCG AGCGTTGCCG CTTGTGCACC CGACCAGGCA
GATGACGAGA GTGTCAATGC AGAAGAACCT GGTACCGGAA CCGCTGCCGC GCCGGTCGAC
GAGGGCGAGA CTTACGACTC GTTCTGCCGC TGTAACTGCG GCGACTCCGG CTGCGCCTAC
AAGCTCACCG TGCGCGAGGG CAACGTGACG TTCGTCGAGC CGAAGATCTA TGCTGACGCT
GACGCAGAAA CCAAGGGGCG TTCGCGCATC TGCCTGCGCG GCCTGTCCAA CGTGCAGCGC
GAATACGACC CCGAGCGCAT CCTTTATCCC ATGCGCCGCA CCGGCGAGCG CGGGGCGGGC
GAATGGGAGC GCGTCAGCTG GGACGAAGCC ATTGCCGAAG TTGTCGAAAA GTGGCAGCAG
ATTATTGACG AGGATGGCCC CGCCGCCTTT GCGAAGTGGA CCAACTTCGG ACAGTTCGGC
CAGCTCAACG GCGCATTCGG TTCCTGCTGG AGCCGCCTGG CGTTCTTCAC CGGCTGCTCG
CAGCTGACCA CCGGCGCCGA CTGGGGCTTC ATGTACCCCG TTGGCTTCAA CGTCAGCAAG
TGGCATTACG GCGACAGCAC GTCGGCCCTG CACCGCTGCA AGAACATCGT CATTTGGGGC
GAGGACACCT CGGTCTGCTA CCAGCACACC TGGCGCTACA TCTGCGATGC CAAGGAGGCT
GGCGCCCGGA TCGTCGTCGT GGACCCGCGC TTCACCCGCA CCGCAGCTCA GGGCGACATC
CATCTGCGCC CGCATTACAA TTCCGACTCC GCGCTATGCT TAGGGATTGC GAACTACCTG
ATTGAAAACG AGAAGTACGA CGCCGAGTTC ATGAAATCGT ACTCCGACGG GGCGTTCTTG
GTCCGCAGCG ACACCGGTGC CTACCTGCGC GCAGCCGACG TGAATCTGAC CGCCGCGAAC
ACCGAGCCCG ACGGCAGCCC GCGCCACGAC TGGGACTACG TGGTCTGGGA CGCCGCAGCC
GACGCCGCCG CGCCCGCCAG CGACGCCTCC GACCCGGCGC TGACCGGCAC CTACACGGTT
GAAGGCATCG AGTGCACCAC CGCGTTCAGC CTGTATTCCG CCCGCGCCGC CGAGTGGCCG
CTGGACCGTA CCTCCGACGT GTGCGGCCTG ACCGAAGACG AGATCAAACA GCTGGCCGAC
ATCATTGCCG AGCAGCCCAC GCTCATCAAG CCCGGTCTGG GTATGTCGCA CTCACTGAAC
TGCCATACTG CCATTCAGGC CATGGCAACG CTCGTAACGC TGACCGGCAA CATCGGCAAG
CCCGGCACCG GCCTTTCGTT CTACAGCTCC GACGAGCGCT TCATGGCGAA GGACTACTAC
GGATACCCCG AGGCCAGCAA CGTCGTCACC GACGAGACCG GCGCCGTCAC CATCGAAGGC
GCCACCGAGA ACCGTCGCGG CCCCGCCTAT TCGGTCCTGA AGTTCCCCGA AATCATGAGC
GAGGGCACCT ACGGCGGACA GCCCGCAACC ATCCGCGGCG CCATCGTGCA TTCCGCCAAC
CCCTTGGCCA ACATCCCCGA TCGTCAGGCC ATTTTGGGCG CCGTGCAGAA GCTCGACTAC
CTGGTCGTCG TCGACTTCGT CATGAGCGAA ACGGCCCGCT ACGCCGATAT CGTGCTGCCC
TGCTCCTTCT GGTTCGAGCA GCCCGAAGAG TTCAAGCCCA ACCGCCAGCA CTACGTGCAC
TACGGGCCCG CGGCCATCGA CCCCATTGGC GAGAGCCTGA GCGACTTCGA CATCTGCAAG
CTTATCGGCA CGCAGATGGG CTTCGGCGAG TTCTACGACG AGACCCAGGA AGAGGTCCTG
AAGAACATGA TCGACGGTGC CGAGGCCGTT GACGTGAACG GCGAGGCCAT CACCTTCGAC
CGCCTGGCTG CCGAAGGCCA GATCCGCTTG GCCAAGGACG ACGACTACGA CGGAACGGAC
GTGTGCGCCA CCGACACGGG TCGCTTCAAC TTCTACGTCG AGAACCCGGC GCCGCGTCTG
GATTGGGGCG AGGAGATGCC CGACGAGCAC CTTCCCTACT TCGCGCCGCC GGCCGAGGCC
TGGAACGTGG GATCGGCAGA CTTCCCCGCC AACGAGCTGG CCGAACGGTA CCCGCTCATC
TTCCTGTCGT GCCATTCCCG CTGGCGCATC CACACCACGT ACAGCAACTC CCCGTGGCTG
AAGGAGCTGT ACCCCGAGCC CGTGATCTAC GTGAACCCCG ACGACGCCGA AGCCCGCGGC
ATTGCCGACG GTGACGTGGT CCGCGCGTTC AACGATCGCG GCGAAGTGGT GCTGACCGCG
CATTTCGACG CCGGCCTGTT CCCTGGCACG GTGAACGTGC CCCATGGCTG GCAGGAGGGC
GACTTTATCA AGGGTCACTA TTCCAACCTG TCCTCGCGCG CCACGCACCA ACTGGACGCC
AGCGAGAACT ACTACGACTG CCTGTGCCAA ATCGAGAAGT ACCAGGAGGC TTAA
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| Protein sequence | MTHTAIPQRA VSRRSFMKGS AATVALAGLA SVAACAPDQA DDESVNAEEP GTGTAAAPVD
EGETYDSFCR CNCGDSGCAY KLTVREGNVT FVEPKIYADA DAETKGRSRI CLRGLSNVQR
EYDPERILYP MRRTGERGAG EWERVSWDEA IAEVVEKWQQ IIDEDGPAAF AKWTNFGQFG
QLNGAFGSCW SRLAFFTGCS QLTTGADWGF MYPVGFNVSK WHYGDSTSAL HRCKNIVIWG
EDTSVCYQHT WRYICDAKEA GARIVVVDPR FTRTAAQGDI HLRPHYNSDS ALCLGIANYL
IENEKYDAEF MKSYSDGAFL VRSDTGAYLR AADVNLTAAN TEPDGSPRHD WDYVVWDAAA
DAAAPASDAS DPALTGTYTV EGIECTTAFS LYSARAAEWP LDRTSDVCGL TEDEIKQLAD
IIAEQPTLIK PGLGMSHSLN CHTAIQAMAT LVTLTGNIGK PGTGLSFYSS DERFMAKDYY
GYPEASNVVT DETGAVTIEG ATENRRGPAY SVLKFPEIMS EGTYGGQPAT IRGAIVHSAN
PLANIPDRQA ILGAVQKLDY LVVVDFVMSE TARYADIVLP CSFWFEQPEE FKPNRQHYVH
YGPAAIDPIG ESLSDFDICK LIGTQMGFGE FYDETQEEVL KNMIDGAEAV DVNGEAITFD
RLAAEGQIRL AKDDDYDGTD VCATDTGRFN FYVENPAPRL DWGEEMPDEH LPYFAPPAEA
WNVGSADFPA NELAERYPLI FLSCHSRWRI HTTYSNSPWL KELYPEPVIY VNPDDAEARG
IADGDVVRAF NDRGEVVLTA HFDAGLFPGT VNVPHGWQEG DFIKGHYSNL SSRATHQLDA
SENYYDCLCQ IEKYQEA
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