Gene Shel_04950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04950 
Symbol 
ID8394387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp583678 
End bp583983 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content61% 
IMG OID644985258 
Productuncharacterized protein, possibly involved in aromatic compounds catabolism 
Protein accessionYP_003142904 
Protein GI257063232 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGT TTTGCATGTT GCCGGCAACG CCAATGGGGC CAGTGCGTTG TCGGACCGTC 
ATGGGCGGCG CCATGTTCAC GCTGGCGGAC TACGCCTTCG CCATCGCATC CTGCATCGGC
CAGGCGCCCA CGGTGTCAGT AGCCTCCACT ATCGAGTTTC TGAACGCCGG CACCGGCAAC
GAGATGTATG CGGAATGCAC GATGGACAAG ATGGGCCGCA GCATGTGCTA CGCCGATGTC
AAAGTGACCG ACGAGAACGA CCGCGTGCTG GCCATCGTGA AGATGACCGG GTACCGCTTG
AAATAG
 
Protein sequence
MQPFCMLPAT PMGPVRCRTV MGGAMFTLAD YAFAIASCIG QAPTVSVAST IEFLNAGTGN 
EMYAECTMDK MGRSMCYADV KVTDENDRVL AIVKMTGYRL K