Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04890 |
Symbol | |
ID | 8394381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 574195 |
End bp | 575013 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644985252 |
Product | conserved hypothetical protein TIGR00268 |
Protein accession | YP_003142898 |
Protein GI | 257063226 |
COG category | [R] General function prediction only |
COG ID | [COG1606] ATP-utilizing enzymes of the PP-loop superfamily |
TIGRFAM ID | [TIGR00268] conserved hypothetical protein TIGR00268 |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.138392 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTCCA AAGAGCTCCA AGCGAAATAC GAGATCCTGA AAACCGAGCT GCGCCGGATG GGTTCGGTGG CCGTGGCGTT TTCGGGGGGC GTCGATTCGA CGCTGCTCAC GAAGGTCGCC CACGACGTGT TGGGCGATGC AGCCGTCGCC GTGACGGCGC ACCCCTGCGT CATGCCGGAC CGTGAGCTTG ACGAGGCCAA GGCCTTTTGC GCCGGCGAAG GCATCCGCCA GGTGGTCGTC GAAACCGATG TGTTCGCCAT CGAAGGGTTC GCCCAGAATC CGCCCGACCG TTGCTACCTA TGCAAGAAGG CTCTGTTCAA TCAGATTATG GATGCGGCCG CCGCTGCCGG TGCGGTGCAC GTGGTCGAGG GCTCCAACAT GGACGACTTG GGGGACTACC GTCCCGGTAT GCGGGCCTTG GAGGAAATGG GTGTCGAAAG CCCGTTGCGT ACGGCGGAGC TCACCAAGGC AGAAATCCGC GAACTCTCTC GTGAGCTGGG GCTTCCTACG TGGAGCAAGC CGTCGTTCGC TTGTTTGGCC TCGCGATTCG TGTACGGGGA GGAAATCACC CGGGAGAAGC TTGATCGGGT GGGCGCCGCG GAACAGTTCG TCATGGACCA GGGGTTCGCC CAAGTTCGCG TCAGGATGCA TGGCGACATG GCCCGCATCG AGGTGCCCGA ACAGGACGTG GCGCGCATCG CCGCAGAGCC GCTACGCGCG CGCATCGCCG AACGTCTTCG CGGGCTCGGG TTCTCCTATG TGACGCTTGA CTTGGCAGGA TACCGTACCG GCAGCATGAA CGAGACGCTG CGGCCGTAA
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Protein sequence | MASKELQAKY EILKTELRRM GSVAVAFSGG VDSTLLTKVA HDVLGDAAVA VTAHPCVMPD RELDEAKAFC AGEGIRQVVV ETDVFAIEGF AQNPPDRCYL CKKALFNQIM DAAAAAGAVH VVEGSNMDDL GDYRPGMRAL EEMGVESPLR TAELTKAEIR ELSRELGLPT WSKPSFACLA SRFVYGEEIT REKLDRVGAA EQFVMDQGFA QVRVRMHGDM ARIEVPEQDV ARIAAEPLRA RIAERLRGLG FSYVTLDLAG YRTGSMNETL RP
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