Gene Shel_04890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04890 
Symbol 
ID8394381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp574195 
End bp575013 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content63% 
IMG OID644985252 
Productconserved hypothetical protein TIGR00268 
Protein accessionYP_003142898 
Protein GI257063226 
COG category[R] General function prediction only 
COG ID[COG1606] ATP-utilizing enzymes of the PP-loop superfamily 
TIGRFAM ID[TIGR00268] conserved hypothetical protein TIGR00268 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.138392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA AAGAGCTCCA AGCGAAATAC GAGATCCTGA AAACCGAGCT GCGCCGGATG 
GGTTCGGTGG CCGTGGCGTT TTCGGGGGGC GTCGATTCGA CGCTGCTCAC GAAGGTCGCC
CACGACGTGT TGGGCGATGC AGCCGTCGCC GTGACGGCGC ACCCCTGCGT CATGCCGGAC
CGTGAGCTTG ACGAGGCCAA GGCCTTTTGC GCCGGCGAAG GCATCCGCCA GGTGGTCGTC
GAAACCGATG TGTTCGCCAT CGAAGGGTTC GCCCAGAATC CGCCCGACCG TTGCTACCTA
TGCAAGAAGG CTCTGTTCAA TCAGATTATG GATGCGGCCG CCGCTGCCGG TGCGGTGCAC
GTGGTCGAGG GCTCCAACAT GGACGACTTG GGGGACTACC GTCCCGGTAT GCGGGCCTTG
GAGGAAATGG GTGTCGAAAG CCCGTTGCGT ACGGCGGAGC TCACCAAGGC AGAAATCCGC
GAACTCTCTC GTGAGCTGGG GCTTCCTACG TGGAGCAAGC CGTCGTTCGC TTGTTTGGCC
TCGCGATTCG TGTACGGGGA GGAAATCACC CGGGAGAAGC TTGATCGGGT GGGCGCCGCG
GAACAGTTCG TCATGGACCA GGGGTTCGCC CAAGTTCGCG TCAGGATGCA TGGCGACATG
GCCCGCATCG AGGTGCCCGA ACAGGACGTG GCGCGCATCG CCGCAGAGCC GCTACGCGCG
CGCATCGCCG AACGTCTTCG CGGGCTCGGG TTCTCCTATG TGACGCTTGA CTTGGCAGGA
TACCGTACCG GCAGCATGAA CGAGACGCTG CGGCCGTAA
 
Protein sequence
MASKELQAKY EILKTELRRM GSVAVAFSGG VDSTLLTKVA HDVLGDAAVA VTAHPCVMPD 
RELDEAKAFC AGEGIRQVVV ETDVFAIEGF AQNPPDRCYL CKKALFNQIM DAAAAAGAVH
VVEGSNMDDL GDYRPGMRAL EEMGVESPLR TAELTKAEIR ELSRELGLPT WSKPSFACLA
SRFVYGEEIT REKLDRVGAA EQFVMDQGFA QVRVRMHGDM ARIEVPEQDV ARIAAEPLRA
RIAERLRGLG FSYVTLDLAG YRTGSMNETL RP