| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04850 |
|---|
| Symbol | |
|---|
| ID | 8394377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 570611 |
|---|
| End bp | 571903 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644985248 |
|---|
| Product | O-acetylhomoserine sulfhydrolase |
|---|
| Protein accession | YP_003142894 |
|---|
| Protein GI | 257063222 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2873] O-acetylhomoserine sulfhydrylase |
|---|
| TIGRFAM ID | [TIGR01326] OAH/OAS sulfhydrylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.214151 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAATC ATCAGTACAA GTTCGAAACC CTGCAGCTCC ACGTGGGTCA GGAGCAGGCC
GATCCGGCAA CCGATGCCCG TGCCGTGCCT ATCTACCAGA CTACGTCCTA CGTGTTCCAC
AACTCCGCCC ATGCAGCCGA CCGATTCGGC CTGCGCGATG CCGGAAACAT CTACGGACGA
CTGACCAACA CCACACAGAG CGTGTTCGAA GATCGCATCG CCGCGCTTGA AGGCGGCGTG
GCAGGGCTCG CCCTGGCCTC GGGTGCAGCC GCCATCACCT ACACCATTCT GGCGTTGGCC
CAGGCCGGCG GGCATGTCGT GGCCCAAAAG ACGATTTACG GCGGAACCTA CAACCTGCTC
CAGCATACGC TGCGTCCTTT CGGGGTCGAA ACCACCTTTG TCGACACCCA GGACCTTCAG
GCCGTCGAAG ACGCCATCCA GGACAACACC CGGGTCATCT TCATCGAGAC CTTGGGCAAC
CCCAATTCCG ACATCCCCGA CATCGACGCC ATCGCGCACA TCGCCCACAG GCACGGCGTT
CCCCTGGCCA TCGACAACAC CTTCGGCACG CCGTACCTCA TCCGCCCCAT CGAGCACGGC
GCCGACATCG TCGTGCACTC GGCCACCAAG TTCATTGGAG GCCACGGCAC CACGCTGGGC
GGCGTCATTG TGGACGCAGG CACCTTCGAC TGGAATGCAA GCGGCAAGTT CCCCCAGTTC
ACGCAGGCGA ATGACAGCTA CCACGGCATC TCGTTCTCAG ACGCCGCCGG CAAGGCCGCC
TTCGCCACGT ACGTCCGGGC CATCCTGCTT CGCGACACGG GCGCCGCGAT ATCGCCGTTC
AACGCGTTTC TGCTGCTCCA AGGCACCGAG ACCCTGTCGC TGCGGCTCGA CCGACATGCG
GAAAACACCA AGAAGGTTGT GGAATACCTG GTCGCCCATC CGCAGGTGGA GAAAGTGAAC
CATCCGTCGC TGCCCGACCA CCCGGACCAC GACCTGTACC AGCGGTATTT CCCCAACGGC
GGAGGCTCCA TCTTCACCTT CAACATCAAA GGCGGCGTGC AGGAGGCCCA TGCGTTCATC
GACCATCTGC AGCTGTTCTC GCTGCTGGCG AACGTAGCCG ACGTGAAGAG CCTGGTCATA
CACCCGGCAA CCACCACCCA TTCGGAACTG ACCCCCGAAG AGCTGATTGA CCAGGGAATT
CTGCCCAACA CCATCCGCCT GTCCATCGGC ACCGAACATA TCGACGACAT CCTGTACGAC
CTCGATCAGG CGTTTGCAGC CGTAGCGCAA TAG
|
|---|
| Protein sequence | MSNHQYKFET LQLHVGQEQA DPATDARAVP IYQTTSYVFH NSAHAADRFG LRDAGNIYGR
LTNTTQSVFE DRIAALEGGV AGLALASGAA AITYTILALA QAGGHVVAQK TIYGGTYNLL
QHTLRPFGVE TTFVDTQDLQ AVEDAIQDNT RVIFIETLGN PNSDIPDIDA IAHIAHRHGV
PLAIDNTFGT PYLIRPIEHG ADIVVHSATK FIGGHGTTLG GVIVDAGTFD WNASGKFPQF
TQANDSYHGI SFSDAAGKAA FATYVRAILL RDTGAAISPF NAFLLLQGTE TLSLRLDRHA
ENTKKVVEYL VAHPQVEKVN HPSLPDHPDH DLYQRYFPNG GGSIFTFNIK GGVQEAHAFI
DHLQLFSLLA NVADVKSLVI HPATTTHSEL TPEELIDQGI LPNTIRLSIG TEHIDDILYD
LDQAFAAVAQ
|
|---|
| |