Gene Shel_04810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04810 
Symbol 
ID8394373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp567129 
End bp567968 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID644985244 
Productpredicted glutamine amidotransferase 
Protein accessionYP_003142890 
Protein GI257063218 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00756632 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAG TTCATGATCG TCCGATTATA GGCATCGTTC CGACGCAGGA TTTGGCTGCA 
GGACGCATCG AAATCCGCGA CGAGTATCTG GATGCAATCG TCATGGCCGG CGGCACGCCT
CTGGTGTTGC CGCTGACCGA GGACACCGGC GTATACGAAA CGCTGTTTCC GCTGGTGGAC
GGGTTTGTTC TCAGCGGCGG GCACGACATC GACCCCGCTC GCTACGGCGG CGACGCCTCA
AACGACAAGC TGGGCGAGCT CACCCCCATG CGCGATGCGG TGGAATACCT GGTGCTGAGC
TACGCCTATA AATACGACGT GCCAACGCTG GGCATCTGCC GCGGCATGCA GATGATGAAC
GTGTTCTTCG GCGGTACGCT CTACATAGAT CTTGCCGATC AGTTCGACGG GCCCCAAGGC
ATTACCCAGG ACATGCTGAA GCACCAGCAG ACCATCGATT ACAGCGAACC GTCCCATTTT
GTCGACATCG TCCAGTCATC CAAGTTGGGA AACCTGCTGC AAACCGGTCG TATCACAACA
AACTCCATGC ACCACCAGGG CGTTTGCGTT TTGGCGCCGC TGCTGAACCC CGTCGCGTTC
GGTCCTGACG GGCTGGTGGA AGCCATCGAG GTGAAAGATC GTTCCTTCAT GATGGGCGTG
CAGTGGCATC CGGAGTTCTT CGCCGGCGCC AAAAAGATGG GCTGCATTTT CGCGTCGTTG
GTGGACGAGG CGGGTCTGAG CGCCATCCGC CAGCAAAACG GTCGCAAGCC GCTGCCCATC
GTACCGCCGG AGGCCCGCGC GGGCGCATGG CCTGAAGTCG GACGCAGGTC CGAAGGCTAG
 
Protein sequence
MGEVHDRPII GIVPTQDLAA GRIEIRDEYL DAIVMAGGTP LVLPLTEDTG VYETLFPLVD 
GFVLSGGHDI DPARYGGDAS NDKLGELTPM RDAVEYLVLS YAYKYDVPTL GICRGMQMMN
VFFGGTLYID LADQFDGPQG ITQDMLKHQQ TIDYSEPSHF VDIVQSSKLG NLLQTGRITT
NSMHHQGVCV LAPLLNPVAF GPDGLVEAIE VKDRSFMMGV QWHPEFFAGA KKMGCIFASL
VDEAGLSAIR QQNGRKPLPI VPPEARAGAW PEVGRRSEG