Gene Shel_04720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04720 
Symbol 
ID8394364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp557664 
End bp558941 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content58% 
IMG OID644985235 
Productgamma-glutamylcysteine synthetase 
Protein accessionYP_003142881 
Protein GI257063209 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3572] Gamma-glutamylcysteine synthetase 
TIGRFAM ID[TIGR01436] glutamate--cysteine ligase, plant type 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.121071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAACGCC ACCCGAACAC CCAAGCACTC TATGCCGATC AGCCCGCACG CGAGCAGAAC 
ATCCAGGCGC TCGTGAGCCT GTTCGAAAGC GGAATCAAGA AACAGGCCGA AACGCTCGGC
GTCGAAGTAG AGCACACCAT CGTCGATGCC GACGGGCAGC CTTTGACGTA CAGCCAGCCC
AATGGCGTGG CCGACGTCCT TGAAGCTCTC AGCGCTACAT ACCCCCAGGT CACAAAGGAC
GGCATTCATA TTCTCGGCCT GGCACGCCCC AAGATGAACG TCACAATCGA GCCTGCTGCG
CAAATCGAGC TGTCTGCGGG CCCCTTCGTT CGCCTCGACG AGGTCGAGCA GGCCTTTGTA
CAGTTCGATA ACGACGTTGC CCAGATAATC GAACCGCACG GATGCCGCAT GCTGACTTAC
GGATACGACA CCAGTATGAA AGCGGTTGAT AAAGAGCTCA TTCCCAAGGC CCGCTACGAC
TTCATGAACC GCTACCTCTC AACCATTTCG CCGTATGGCC CTCGCATGAT GCGCGGCAGC
GCCTCGACGC AGATTTCCAT TGACTTCACC AGCGAAGCGG ATGCCGTCCG CAAGCTCCGG
CTTTCGAACG TACTTGCCCC AATCTTCGCT CTCATCTGCG ACAATACCCC GGTATTTGAG
GGGAAGAAGG CGCCCCATTA CATGATGCGC ACTGAAATCT GGCGCCACCT TGATCCTGTC
CGTTGCAATA CGGTGCCTGG TTCGTTGGCC GAAGATTTCA GCTTCCGCAA ATACGCCGAA
TACGTCCTGG GCGTGCCGGC GATCGTTGCT CCCAATGGCG AAGGCGGTTT CCGTTACGAC
ACGCGCACGT TCGGCGAAAT CTATGCCGAA GTGCCCATGG AACGCCCCGA CGTGGAGCAT
GCGCTGTCCA TGCAATGGCC AGACACACGT CTGAAAACCT ATCTTGAAAT CCGTCCCGCA
GACTCGATGC CCACACCTTA TGTGGTTGCA TACGCCGGAT TGGTCAAGGG CCTGTTCTAC
TCCGAATCAT CCCTGAACGC TTTGGACGAC ATGCTCTGCG ACGTTCTTGA CGAGGCTCTT
GTCGAAGATG CCAAGACGCA GCTCATGAGG CTCGGCTACG ACGCGCAGGC GTACGGCATG
CCGGTGTCGG ACATCGCCGA CAAGGTCATC GAACTGGCAT ACGCCGCACT CGGTAGCGAC
GAGAAACGCT ACCTTGATCC GCTGGCTGAG CTCGTGGAAA AACGCATCAC CCTCACCCAG
CTTTCCGATC TGTGGTAA
 
Protein sequence
MERHPNTQAL YADQPAREQN IQALVSLFES GIKKQAETLG VEVEHTIVDA DGQPLTYSQP 
NGVADVLEAL SATYPQVTKD GIHILGLARP KMNVTIEPAA QIELSAGPFV RLDEVEQAFV
QFDNDVAQII EPHGCRMLTY GYDTSMKAVD KELIPKARYD FMNRYLSTIS PYGPRMMRGS
ASTQISIDFT SEADAVRKLR LSNVLAPIFA LICDNTPVFE GKKAPHYMMR TEIWRHLDPV
RCNTVPGSLA EDFSFRKYAE YVLGVPAIVA PNGEGGFRYD TRTFGEIYAE VPMERPDVEH
ALSMQWPDTR LKTYLEIRPA DSMPTPYVVA YAGLVKGLFY SESSLNALDD MLCDVLDEAL
VEDAKTQLMR LGYDAQAYGM PVSDIADKVI ELAYAALGSD EKRYLDPLAE LVEKRITLTQ
LSDLW