| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04690 |
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| Symbol | |
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| ID | 8394361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 554351 |
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| End bp | 556786 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985232 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_003142878 |
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| Protein GI | 257063206 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00343492 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAATTT CCATGAAATG GCTTGCCGAC TACGTGCAGG TGCCTGATGA AATCAAAGCG
TTTTGCGACC AGCTGGATCT GACCGGCACG GGCGTTGAGG AGGTCGACCG CTTGGGCGAC
ACCTTCGACC ACATCGTGAC CGCGCAGGTC GTGTCCAAGG AGCCGCATCC GGACTCCGAC
CACATGTTCG TCTGCCAGGT GGACGTGGGT CAGGCCGAGC CGATTCAGGT CGTGTGTGGC
GCACAGAACT TCAACCAGGG CGACCACATT ATCACGGCGC TCGTGGGTGC TGAACTGCCT
GGTGGCATCA AGATCAAGAA ATCCAAGCTC CGCGGCGTCA CGTCCAACGG CATGAACTGC
TCTGCCCGTG AACTCGGTTT GGGCAACGAC CATTCCGGCA TCATGATTCT GCCTGAGGAT
GCCCCCATCG GCATGCCCGC TGCCGACTAT CTGGGAATCG GCGACACGGT TCTTGATCTG
GAAATCACGC CGAACCGTCC TGACAGCCTG TCAGTGGTCG GTTTCGCCCG CGAAGTCGGT
GCCATGTACG ACATCGACAT TACGCTGCCC AGCCGCGAGC TGACGGAGAC CGACGAGCTT
ACGTCGGACG CCGTCGCCGT TCAGATCCCC GATCCGGAAT TGTGTCCGCG CTACACGGCT
CGTCTTATTC GCAACGTCAA GGTGGGCCCG TCTCCCGATT GGTTGGTCGA GCGACTGGCG
GCCATTGGGC AGCGTTCCAT CAACAACATC GTGGACGTGA CCAACTACGT GCTCTTCGAG
TTGGGCCAGC CGCTGCACAC CTTCGACTTC GATACGTTGG ACGTTGAGAA CGGTAAGGCG
ACCATCATCG TGCGTGCTGC CGAAGAGGGC GAGAAAATCA CCACACTGGA TGGCGCCGAG
CGTGAGCTCA CCAGCGACAT GACGGTCATT TCCACGCCGA AGCGCGCCGT TGCGTTGGCC
GGCGTCATGG GCGGCATCGA CTCCGAGGTG ACCGAAGGCA CGACGAACGT CCTTCTGGAA
GCCGCAACCT TCAATCAGGC GCATACGAGT CGCACCAGCC GCAACCTCGG CCTGATCAGC
GAGTCCTCCA TCCGCTACGA GCGCCGCGTC GACGATCATG ACATCGACTG GCGTAGCGAT
TACGCCGCAG CGCTTATCGC CGAAGTTTCA GGCGGCACGG TGTGCAAGGG CATCGTCGAC
GAATGGCCTG CCGGTGACAC TCCCGCTCGC GAACTGCCGC TGCGTGTGAA GCGTTGCCAG
CAGATGCTGG GCGACGACGT GCCTGTCGAA TTCATGAAGA GCCGCCTGAC GCGTCTGGGT
TGCACGGTCG CCGACACTGA AGACCCCGAC GTTCTGTCGG TAACCGTCCC GACCTACCGT
CCCGACCTTG AGCGCGAGAT TGACCTGTAC GAAGAAGTCC TGCGTCTGTA TGGCATGGAC
CGCATCCCTT CGACGCTGCC TGCTGGCCGC GGTCGCGTGG GTGTTCTTAC CCCGCAGCAG
CTCATCGATG CGAAGCTGCA TCGCACGCTT TCCGCAAGCG GCATGAACGA GACCATGACC
TATTCCTTCG CCCATGTGGA CGATCTCGAA AACCTGCGCA TGAAGGAAGA CGGCCTGGGC
GATCCTGTGG AGCTCATCAA TCCGATGAAT GCAGAGCAGG CCCATATGCG CCGCACCATT
ATCCCCGGCC TGCTTCGCAG CATCGCCTAC AACCAGAGCC GTGGCGTCAA CAATATCCAG
CTGTACGAAA TCGGCACGGT CTTCGCCGCT CACGAGGGTT CCAAGAAGCC CAAGGAGCGT
CGCAAGCTGG CTGGCGTTCT GGCTGGGTCC ATGGGCGTCA AGGGTTGGAA CACCGACCCG
GCACCCTTCG ACTTCTTCGA CGGCAAGGGC GTTCTGGAAA GTATCGCCCG TGAGCTCGCA
CTGCCAAAGG TGACGTTCCG CGCGTTGAGC GCCGAAGATG CTCCGCATCT GCAGCCCGGC
CGCGCAGCCC GCATGCTTTC CGGCGGCGAC GAGATTGGCT GGATTGGCGA AATCCATCCT
CTGGCCGCCG ACGCCTTCGA CGCAAAGGCG CCTATCGTCG CCTTCGAACT GGATATGAAT
GCTCTTGAGC GCAATGCCCG TCCTGCCCGC GACTACGTCG ATGTGCCCCA GTTCCCTGAG
GTCGCCCGCG ACGCAGCTTT CGTGGTGGAC GAAACCGTCA CTAACGAGAA ACTGATGCAG
TGCATGAAGT CTGCCGGCGG CAAGCTGCTC GAGGAAGTTC GCCTGTTCGA TGTCTACCGT
TCCGATAAAC ATCTTGGGGC AGGCAAGAAA TCCATGGCCT ACTCGCTGAC TTACCGTGCG
GCAGACCGCA CGTTGACCAG CGAGGAAGTG GACAAGGCCC ACAACAAGCT TATCGACAAG
ACCTGCCGCG CTACCGGCGC CGAGGTTCGC GGATAA
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| Protein sequence | MKISMKWLAD YVQVPDEIKA FCDQLDLTGT GVEEVDRLGD TFDHIVTAQV VSKEPHPDSD
HMFVCQVDVG QAEPIQVVCG AQNFNQGDHI ITALVGAELP GGIKIKKSKL RGVTSNGMNC
SARELGLGND HSGIMILPED APIGMPAADY LGIGDTVLDL EITPNRPDSL SVVGFAREVG
AMYDIDITLP SRELTETDEL TSDAVAVQIP DPELCPRYTA RLIRNVKVGP SPDWLVERLA
AIGQRSINNI VDVTNYVLFE LGQPLHTFDF DTLDVENGKA TIIVRAAEEG EKITTLDGAE
RELTSDMTVI STPKRAVALA GVMGGIDSEV TEGTTNVLLE AATFNQAHTS RTSRNLGLIS
ESSIRYERRV DDHDIDWRSD YAAALIAEVS GGTVCKGIVD EWPAGDTPAR ELPLRVKRCQ
QMLGDDVPVE FMKSRLTRLG CTVADTEDPD VLSVTVPTYR PDLEREIDLY EEVLRLYGMD
RIPSTLPAGR GRVGVLTPQQ LIDAKLHRTL SASGMNETMT YSFAHVDDLE NLRMKEDGLG
DPVELINPMN AEQAHMRRTI IPGLLRSIAY NQSRGVNNIQ LYEIGTVFAA HEGSKKPKER
RKLAGVLAGS MGVKGWNTDP APFDFFDGKG VLESIARELA LPKVTFRALS AEDAPHLQPG
RAARMLSGGD EIGWIGEIHP LAADAFDAKA PIVAFELDMN ALERNARPAR DYVDVPQFPE
VARDAAFVVD ETVTNEKLMQ CMKSAGGKLL EEVRLFDVYR SDKHLGAGKK SMAYSLTYRA
ADRTLTSEEV DKAHNKLIDK TCRATGAEVR G
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