| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04650 |
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| Symbol | panF |
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| ID | 8394357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 549981 |
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| End bp | 551471 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644985228 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_003142874 |
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| Protein GI | 257063202 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00393427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000895838 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGCTA ACATCGCAGG CATCCTGCCC GTCCTCCTGT TCTTGGCGTT TGCGATGGTG
GTGGCCATCG TCGTCCGTCG CCGCGCTGCC AAGCAGGCGG AACAGGGATT CGTGAAGGAA
TACTTCATCG GCAACCGCGG TCTGGGCGCC TTCGTCCTGG CCATGACCAC CATCGCGACG
TACGGTTCCG TCAGCTCGTT CGTGGGCGGC CCGGGCCAGG CTTGGAACAT CGGCTGGGGC
TGGGTTTATA TGGCTGCCGT CCAGGTCACG ACGCTGTTCT TGCTGTATGG CATCATGGGC
AAGAAGATGG CCCTGGTTTC CCGCAAGACG GGCGCCGTCA CGGTCATCGA CGTCATCCGC
GAGCGTTACC AATCCGACGC GCTGGCCATC ATTGCAGCCG TCATCATGGT GCTGTTCTTC
GCAACCACGA TGATCGCCCA GTTCGTAGGC GGAGCAAAGC TGTTCGAATA CGTGACCGGC
TACTCCTACA ATATCGGCCT GATCATCTTC GGCGTGGCCT GCATCCTGTT CACCACCATC
GGCGGCTTCC GCGGCGTGGC CGTTACCGAC GCCTTGTGCG GCATCGCCAT GCTCGTGGGT
ATCGCCGTGC TGGCGGGCGG CATCCTGAAT GCAGGCGGCG GCTACGAGGC CGTCATGACC
ACCATCGCTA CCAACCATCC CGAGATGATG GAACCCCTGT CTGGCGGTAA CATGCCCTAC
GGCCTGTACT TCACCCAGTG GCTGCTGGTG GGCATCTTCA CCTTCTGCCT GCCGCAGTCC
GTTGTCCGTA CCATGGGTTA TAAGGATACG AAGAGCCTGC ACAACGCCAT GATCTGGGGC
ACCGTGATCC TCGGCGCTAT GATGATCGGC GTTACCTCGC TGGGCGTGCT GAGCGCCGGC
GTTCTGACAG ACACCGTCGA AGCCTACGGC GGCAGCATCG ACAACATCAT CCCGCAGGCT
ATCGTGCAGA CGCTTCCCTC GTGGCTGGCC GGAGTGGCCA TCATCGGCCC TATCGCCGCT
TCCATCTCCA CGGTCAGCTC GCTGCTGATC GCCTCCAGCT CGGCCATCAT CAAGGACATC
TGGCTGCATC ATTGCGAAGC GAAGGGCGCT CTTCCCGAGG ACAAGCTGGT CCGCAACTCC
AGCCAGGCCA TCACCCTTTT GCTCGGTGCC ATCGTGTTCA TCCTGTCTAT CGTCCCGCCC
GAGGTCATCT GGAAAATCAA CATGTTCGCT TTCGGCGGTC TGGAAACGGC GTTCTGCTGG
GTTCTGGTGG GCGGTCTGTT CTGGAAGCGT GCGAACAAGT ACGGCGCCAT CCTTTCCATG
GCGGGCGGTG TGCTGGTCTA CTGCCTGGCC ATGTACTTCG GATTCAAGAT CGGCGGTTTG
CATCAGATTA CCATCGGCAT CACCGTGTCG TTCATCCTGA TGATCATCGG TTCGCTTGCC
ACCAAGGCCG ACGATCCGAA GCGTTTGGAG ATGTTCTTCC CCAGCAAGTA G
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| Protein sequence | MSANIAGILP VLLFLAFAMV VAIVVRRRAA KQAEQGFVKE YFIGNRGLGA FVLAMTTIAT
YGSVSSFVGG PGQAWNIGWG WVYMAAVQVT TLFLLYGIMG KKMALVSRKT GAVTVIDVIR
ERYQSDALAI IAAVIMVLFF ATTMIAQFVG GAKLFEYVTG YSYNIGLIIF GVACILFTTI
GGFRGVAVTD ALCGIAMLVG IAVLAGGILN AGGGYEAVMT TIATNHPEMM EPLSGGNMPY
GLYFTQWLLV GIFTFCLPQS VVRTMGYKDT KSLHNAMIWG TVILGAMMIG VTSLGVLSAG
VLTDTVEAYG GSIDNIIPQA IVQTLPSWLA GVAIIGPIAA SISTVSSLLI ASSSAIIKDI
WLHHCEAKGA LPEDKLVRNS SQAITLLLGA IVFILSIVPP EVIWKINMFA FGGLETAFCW
VLVGGLFWKR ANKYGAILSM AGGVLVYCLA MYFGFKIGGL HQITIGITVS FILMIIGSLA
TKADDPKRLE MFFPSK
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