Gene Shel_04620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04620 
Symbol 
ID8394354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp547056 
End bp547838 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content59% 
IMG OID644985225 
Producthypothetical protein 
Protein accessionYP_003142871 
Protein GI257063199 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.1961 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000338147 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCTGA AATTTATCGT CTCACCTGCG AAGAAAATGA ATGTCGACGA CATGTTCGCC 
TGGCGTGGCA TGCCGCGGTT CATCGATCGC ACGCGCCTTG TGGCTGAAGC CCTGCACCGC
TTGACCTTCG ACGAGCTGCA AAAACTCTGG AACTGCAGCG ACGCCTTAGC CCAGCAGAAC
TTCGAACGGT TGCGCACGTG TGAGCCCGGC ACGGGCTGGG ACACGGGAGA ATGCGGCCTG
CTCACGCCGG CGATCATGGC CTACGAGGGC ATCCAATACC AGAACATGGC CCCCACCGTG
ATGAACGACG ATTCGCTCGA GTATATCCAA GACCACCTAC GTATCCTGTC GGGATTCTAC
GGCATGTTGC GACCCTTCGA CGCGGTAATC CCCTACCGTC TTGAAATGCA AGCGAAACTC
CAGGTCGAAG GCGCAAAAGA CCTGTACGCA TTCTGGGGGA GCTCCCTTTA TGACGCGATT
GCCGAAGAGT GCGCGGGCAA CGGGGCCATC ATCAACATCG CCTCAGTGGA ATACTCGAAG
GCCGTCACGC CCCACATCCG ACCCGACGGC CCCCAGGTAA TCACCTGCCT GTTCGGCGAC
ATTACCGACG CCGGAAAGCT GCGGCAACGC TCGACCTACG CCAAGGCGGC CCGTGGAAGC
TTTGTACGGT GGTGTGCCGA AAACGTCGTC GACACCCTTG ACGACCTGCG GAGATTCGAT
GCCGGATACC GTTTCGACCC GGACCGCTCA ACCCCTGGCA CCCTTGTGTT CGTCGAAGCG
TAG
 
Protein sequence
MDLKFIVSPA KKMNVDDMFA WRGMPRFIDR TRLVAEALHR LTFDELQKLW NCSDALAQQN 
FERLRTCEPG TGWDTGECGL LTPAIMAYEG IQYQNMAPTV MNDDSLEYIQ DHLRILSGFY
GMLRPFDAVI PYRLEMQAKL QVEGAKDLYA FWGSSLYDAI AEECAGNGAI INIASVEYSK
AVTPHIRPDG PQVITCLFGD ITDAGKLRQR STYAKAARGS FVRWCAENVV DTLDDLRRFD
AGYRFDPDRS TPGTLVFVEA