Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04620 |
Symbol | |
ID | 8394354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 547056 |
End bp | 547838 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985225 |
Product | hypothetical protein |
Protein accession | YP_003142871 |
Protein GI | 257063199 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.1961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000338147 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCTGA AATTTATCGT CTCACCTGCG AAGAAAATGA ATGTCGACGA CATGTTCGCC TGGCGTGGCA TGCCGCGGTT CATCGATCGC ACGCGCCTTG TGGCTGAAGC CCTGCACCGC TTGACCTTCG ACGAGCTGCA AAAACTCTGG AACTGCAGCG ACGCCTTAGC CCAGCAGAAC TTCGAACGGT TGCGCACGTG TGAGCCCGGC ACGGGCTGGG ACACGGGAGA ATGCGGCCTG CTCACGCCGG CGATCATGGC CTACGAGGGC ATCCAATACC AGAACATGGC CCCCACCGTG ATGAACGACG ATTCGCTCGA GTATATCCAA GACCACCTAC GTATCCTGTC GGGATTCTAC GGCATGTTGC GACCCTTCGA CGCGGTAATC CCCTACCGTC TTGAAATGCA AGCGAAACTC CAGGTCGAAG GCGCAAAAGA CCTGTACGCA TTCTGGGGGA GCTCCCTTTA TGACGCGATT GCCGAAGAGT GCGCGGGCAA CGGGGCCATC ATCAACATCG CCTCAGTGGA ATACTCGAAG GCCGTCACGC CCCACATCCG ACCCGACGGC CCCCAGGTAA TCACCTGCCT GTTCGGCGAC ATTACCGACG CCGGAAAGCT GCGGCAACGC TCGACCTACG CCAAGGCGGC CCGTGGAAGC TTTGTACGGT GGTGTGCCGA AAACGTCGTC GACACCCTTG ACGACCTGCG GAGATTCGAT GCCGGATACC GTTTCGACCC GGACCGCTCA ACCCCTGGCA CCCTTGTGTT CGTCGAAGCG TAG
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Protein sequence | MDLKFIVSPA KKMNVDDMFA WRGMPRFIDR TRLVAEALHR LTFDELQKLW NCSDALAQQN FERLRTCEPG TGWDTGECGL LTPAIMAYEG IQYQNMAPTV MNDDSLEYIQ DHLRILSGFY GMLRPFDAVI PYRLEMQAKL QVEGAKDLYA FWGSSLYDAI AEECAGNGAI INIASVEYSK AVTPHIRPDG PQVITCLFGD ITDAGKLRQR STYAKAARGS FVRWCAENVV DTLDDLRRFD AGYRFDPDRS TPGTLVFVEA
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