| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04600 |
|---|
| Symbol | |
|---|
| ID | 8394352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 544831 |
|---|
| End bp | 546234 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985223 |
|---|
| Product | uracil-xanthine permease |
|---|
| Protein accession | YP_003142869 |
|---|
| Protein GI | 257063197 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0641313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000000425239 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCAATCA ACACTGTTCC GACCATGGGT GGCCAAGACG CCCCCGACGC CGTTTACGAC
GCGCGCGAAC TCGGCACGCC GAAAATGGTG GTTTTCGGCT TCCAGCACAT GTTCGCGATG
TTCGGCGCCA CCATCCTGGT GCCTGTCCTC ACCGGCCTGT CAGTCTCCGC AACGCTGCTG
TTCGCAGGCT TGGGCACGCT GCTCTTCCAC CTGCTCTCCC AGCGGAAGGT GCCGGCATTC
CTCGGTTCCT CCTTCGCGTT CATCGCAGGC TATGCAGCCA TCGCCCCCAA CGGCGAACCC
GAGCTGCTCC CCTATGCCTG CCTGGGCGTA GCCAGCGCCG GCCTTCTGTA TCTGGTCCTG
TCGGCGGCCT TTAAGGCTTT CGGCGCCAAG CGCGTCATGC GTTTCTTCCC GCCCGTGGTC
ACAGGCCCCA TCGTCATCGC CATCGGCCTG ATTCTGGCAA GCTCCGCAAT CGCCAATTGC
TCGACCAATT GGCTGGTCGC ATTGGTTGCC ATCATTACCA TCGTGGTGTG CAACATTTGG
GCCAAGGGCA TGATCCGTAT CATCCCCATC CTCATGGGCG TCATCGTGTC GTATATCTTC
GCCGTCATCG TCGGCATCGT CGACTTCTCC GGCGTCCAGA GCGCCGAATG GGTGGGCCTA
CCCGTCCTGT GGGACAACAC CGTTTTCGGC ATCTTGGGTG AGGGCTTCGA CTCCGGCCTG
GCCCTGACCG CCGTCATCAC CATCATGCCC ATCGCGTTCG CGACCATGAT CGAGCACATC
GGCGACATTT CCGCCATCAG CTCCACCGTG AACCGCAACT ACATCGCCGA TCCCGGCCTG
CACCGCACGC TGCTCGGCGA CGGCCTGGCC ACCATTCTGG CGTCCCTCTT CGGCGCGCCG
GCCAACACCA CGTACGGCGA AAACACCGGC GTTCTGGCGC TGACCCACGT GTTCGACCCC
CGCGTCGTGC GCCTGGCAGC CTGCTTCGCC ATCGTATTCT CCTTCTGCCC GAAGTTCGCA
GCCGTCATCG GCGCCATGCC TCCGAGCGTT ATCGGCGGCG TTTCGCTGGT CCTGTACGGC
ATGATCTCCT CGGTCGGCAT CCGCAACCTG GTCGAAAGCC ACGTTGACTT CACGAAAACC
CGTAACGTCC TGGTCACGGC CCTGATTCTG GTTCTGTCCA TCGGCATCGC CTACAGCGCC
GCGGGCGCCA TCGTCTTCTC GGTGGGCGAA ATCACCGTGT CCCTGTCCGG CCTGGCTATC
GGCTCGCTGG CGGGCATCCT CCTGAACATC ATCCTGCCCG AGCACGACGG CGACGGCATC
GAGCCCACCC TGCCGCGCGA CCATCCGAAG CGCCAGCTCA TGATGGAAGG CCCCGAAGGC
TACGACAACA TCGTCGAAGA GTAG
|
|---|
| Protein sequence | MAINTVPTMG GQDAPDAVYD ARELGTPKMV VFGFQHMFAM FGATILVPVL TGLSVSATLL
FAGLGTLLFH LLSQRKVPAF LGSSFAFIAG YAAIAPNGEP ELLPYACLGV ASAGLLYLVL
SAAFKAFGAK RVMRFFPPVV TGPIVIAIGL ILASSAIANC STNWLVALVA IITIVVCNIW
AKGMIRIIPI LMGVIVSYIF AVIVGIVDFS GVQSAEWVGL PVLWDNTVFG ILGEGFDSGL
ALTAVITIMP IAFATMIEHI GDISAISSTV NRNYIADPGL HRTLLGDGLA TILASLFGAP
ANTTYGENTG VLALTHVFDP RVVRLAACFA IVFSFCPKFA AVIGAMPPSV IGGVSLVLYG
MISSVGIRNL VESHVDFTKT RNVLVTALIL VLSIGIAYSA AGAIVFSVGE ITVSLSGLAI
GSLAGILLNI ILPEHDGDGI EPTLPRDHPK RQLMMEGPEG YDNIVEE
|
|---|
| |