Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04540 |
Symbol | |
ID | 8394346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 536663 |
End bp | 537481 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985217 |
Product | sporulation related protein |
Protein accession | YP_003142863 |
Protein GI | 257063191 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000449317 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTTGTA CGAAATGCGG CGCCACGGTG GAGCCCGGTT TTGACTTCTG CACGAAATGC GGCGCGCCCG TTACTCAGAA TGCGGACACG ACGATGCAGA TGCAAACGTC GGTCGGCGCG CAACCGACCT ATGTGCAAGC CGCACCCACA CCCCAGCCGC AGACCAAAAG CAAAACGCCG ATCATAGTCG CCATCGCCAG CGTCCTCATC GTGCTGATCG CCGTCGGCGT CGCGTTCGCC GTAATGAGCA CGTCCGATGA CGCGGATGCC GACAAGGCCA CCACCAGCAT CCACGCCACC AAGGACAAGA AATCCGAAAA GGAAGAATCC GCCGATGAGG ACAAGGACGC CAAGGCTGAA ACCGAGGCTG AAACCGAGGC TGAAACCGAA GCCAAGTCTG ACGGCGCAAC CGTCGTAGAG ACCCGCGAGG ACGCCCCCGC AACCGAGGGC GTGCCTGCCG AGAACGCCTC AAGCACGTCA TCTACCAGCG ACGACGCCGT AGAAGCAACC GTCGAGACCC AGGAAGAATC CTCCGCAGGC AGCACTGCAG TCGCCGAGGG CGAACCTTTC TACGGCGTAT GGATGTCGGC CTCGAAGGAC CAGGGCAACG CGCAGGCGTT CGTCGACCAG CTGCGCTCCG AAGGCTATGA CGCCAAGCTG TACGTATCCT CCGAGTGGAG CAACCTCAAT CCCGAAACCT GGTATGTGGT GGCCGCAGCC TCAACCGCCA CGGAGTCCGA GGCGAACGCC GTGTGCGACC AGGCCCACGC CGACGGCTAT GCCGACGCAT ACGTGAAGTA CTCCGGCGAG CATCTGTAG
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Protein sequence | MFCTKCGATV EPGFDFCTKC GAPVTQNADT TMQMQTSVGA QPTYVQAAPT PQPQTKSKTP IIVAIASVLI VLIAVGVAFA VMSTSDDADA DKATTSIHAT KDKKSEKEES ADEDKDAKAE TEAETEAETE AKSDGATVVE TREDAPATEG VPAENASSTS STSDDAVEAT VETQEESSAG STAVAEGEPF YGVWMSASKD QGNAQAFVDQ LRSEGYDAKL YVSSEWSNLN PETWYVVAAA STATESEANA VCDQAHADGY ADAYVKYSGE HL
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