Gene Shel_04540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04540 
Symbol 
ID8394346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp536663 
End bp537481 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID644985217 
Productsporulation related protein 
Protein accessionYP_003142863 
Protein GI257063191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000449317 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTGTA CGAAATGCGG CGCCACGGTG GAGCCCGGTT TTGACTTCTG CACGAAATGC 
GGCGCGCCCG TTACTCAGAA TGCGGACACG ACGATGCAGA TGCAAACGTC GGTCGGCGCG
CAACCGACCT ATGTGCAAGC CGCACCCACA CCCCAGCCGC AGACCAAAAG CAAAACGCCG
ATCATAGTCG CCATCGCCAG CGTCCTCATC GTGCTGATCG CCGTCGGCGT CGCGTTCGCC
GTAATGAGCA CGTCCGATGA CGCGGATGCC GACAAGGCCA CCACCAGCAT CCACGCCACC
AAGGACAAGA AATCCGAAAA GGAAGAATCC GCCGATGAGG ACAAGGACGC CAAGGCTGAA
ACCGAGGCTG AAACCGAGGC TGAAACCGAA GCCAAGTCTG ACGGCGCAAC CGTCGTAGAG
ACCCGCGAGG ACGCCCCCGC AACCGAGGGC GTGCCTGCCG AGAACGCCTC AAGCACGTCA
TCTACCAGCG ACGACGCCGT AGAAGCAACC GTCGAGACCC AGGAAGAATC CTCCGCAGGC
AGCACTGCAG TCGCCGAGGG CGAACCTTTC TACGGCGTAT GGATGTCGGC CTCGAAGGAC
CAGGGCAACG CGCAGGCGTT CGTCGACCAG CTGCGCTCCG AAGGCTATGA CGCCAAGCTG
TACGTATCCT CCGAGTGGAG CAACCTCAAT CCCGAAACCT GGTATGTGGT GGCCGCAGCC
TCAACCGCCA CGGAGTCCGA GGCGAACGCC GTGTGCGACC AGGCCCACGC CGACGGCTAT
GCCGACGCAT ACGTGAAGTA CTCCGGCGAG CATCTGTAG
 
Protein sequence
MFCTKCGATV EPGFDFCTKC GAPVTQNADT TMQMQTSVGA QPTYVQAAPT PQPQTKSKTP 
IIVAIASVLI VLIAVGVAFA VMSTSDDADA DKATTSIHAT KDKKSEKEES ADEDKDAKAE
TEAETEAETE AKSDGATVVE TREDAPATEG VPAENASSTS STSDDAVEAT VETQEESSAG
STAVAEGEPF YGVWMSASKD QGNAQAFVDQ LRSEGYDAKL YVSSEWSNLN PETWYVVAAA
STATESEANA VCDQAHADGY ADAYVKYSGE HL