Gene Shel_04450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04450 
Symbol 
ID8394337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp528705 
End bp530573 
Gene Length1869 bp 
Protein Length622 aa 
Translation table11 
GC content59% 
IMG OID644985208 
Productaldehyde:ferredoxin oxidoreductase 
Protein accessionYP_003142854 
Protein GI257063182 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000642234 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAAACA AGTATTACAA AGGCACCATC CTGCGCATCA ATTTGAGCGA CAAGAGCGTA 
ACCCACGAGC AATTCGACGG CGAGCAGCTG CGGAAGTTCG TGGGGGGCGC AGGCTTGGGT
ATCAAGATGC TCTACGATGA GGTTGCACCC AATGTCGGGC CTACCGACCC CGAGAACAAG
ATCTTTTTAT GCGCTGGTCC CTTGAGCGGC ACAAGGATTC CCGGATCGGG AAACTACACC
GTCTGCACGC GCGGCGGAGT CACCGGGCTC ATGACCTCTG CTCAGGCAAA CGGATTCTTC
GGAGCACGCA TGCGCCAAGC GGGTTACGAC GTCATTGCAA TCGAGGGCGT CGCCGAAGAA
TGGTCCTACA TCGCCATCAT AGACGACAAG GTTGAAATAC GGCCGGCAAC AGAGCTACTT
GGCAAGAGCA CGTCCGAAGT CCAGGACATC CTGAAAGACG AAATGGGCAA GAAGGTTTCG
ATAGCGGGCA TCGGCGCTGC GGGCGAGCAT CTATTGCCAA TCGCCAGCAT TTCCGGCGAC
TATCACCATC GCGCCACGTC CAATGGCCCC GGGCTCGCAA TGGGTGCCAA GAAGCTGAAG
TGCGTGGCGG TTCTAGCGAC GGACAACGCC ATCGAGTATC CGGACGAAGC GCAGGTCAAG
GCCTTTGTAA AGGACGAATT CCTAAAGCGT TCCATGGAGC CCGCACTTGC CCAAGCTGTG
GACAAGTGCG GTACGACATC CTGGTTCGAC CTGGTCGGGC CAGGGGGAGG CGTAGCCATC
AAGAACTACA CAACGAACGT TTCCGACACG CTCGAGAAAC TTTCGGTACC CACCTACCTC
GCATCGCTTG AAAGCCGCAA ACGCAAGCCC TGCTGGAACT GTCCGATGCA TCACGGCTAC
GACGTCGTCT TCAAAGAGGG CTCGCACGCC GGCGTGGCAT TCGATGAGGT CGAATACGAG
ATGATGGCGG CGTTCTCCAC GAACATCGGC AACGACGACA TCAGCCTTGC CGCGTGGCTG
GCATCCCTTA TGGAGACCTA TGGCGTGGAC GGCAAGGAAA TCGCGTGGAG CATCGCGCTG
GTTTACGACT GCTTCGAGCA TGGGGTCATC ACGCTCGAAG ACACGGGCGG CATGTCGTTC
AAATGGGGCG AGACAGCCGA TCTTCCCGAG CTGATTGACC AAATCTGCAC GCGGAGGGGC
TTTGGCGCAA CGTTCTCGGA CGGCGTGAAA GTTGGAGCGG AACGCATCGG AGGCGAAGCC
GTTAACATGG CCGTCTGGGC CGGAAAGGGC AACGCGCCCC ACGTCACCGA TGACCGAGGC
GTGGGCGTGT GGGGCTTCGA AGTAACGTAT GCCTGCTCGG ACAATGGTTC GTTCTACGGA
TCGGAGAGCT ACGACCCCGA GGTAGGCAAC AACGAGCCGA CGGAGCCCTT CGACGTTGAG
CGCATCCCTA TTGCCGCGAA GAACGACAGC GTGAAATGGG TTTACATGGA CATGGTCGGC
CTGTGCATGT TCTTTGCGCA GAACCAATCT GTTCTGGTGG AGGCCATAAA CTCCGTGACC
GGCTGGGATA TGACCGGCAA AGAGCTCTAC GAGGCCGGCG ACCGAGTGCG TGCGCTGTCC
CGTTCGTACA ACATGCTCTG CGGACGCACG AGGGAAGACG ACCGTGTGTC TCCGCGCATG
AAGGCGGCAA ACGTGGATGG CCCGGCGAAG GGCCATTGCG TAGGCGACGA CCTCGATGCG
ATGATTGAGC GCTACCTCGA GGCGAACGAA TACGATGTTG AAACGGGAAA GCCGAAGCCG
GAGCTTCTGG AGCGGCTTGG CTTGGGATAC GTAGTTGCCA ATCTTTGGCC AGAGCACGTC
TCGGCGTAA
 
Protein sequence
MQNKYYKGTI LRINLSDKSV THEQFDGEQL RKFVGGAGLG IKMLYDEVAP NVGPTDPENK 
IFLCAGPLSG TRIPGSGNYT VCTRGGVTGL MTSAQANGFF GARMRQAGYD VIAIEGVAEE
WSYIAIIDDK VEIRPATELL GKSTSEVQDI LKDEMGKKVS IAGIGAAGEH LLPIASISGD
YHHRATSNGP GLAMGAKKLK CVAVLATDNA IEYPDEAQVK AFVKDEFLKR SMEPALAQAV
DKCGTTSWFD LVGPGGGVAI KNYTTNVSDT LEKLSVPTYL ASLESRKRKP CWNCPMHHGY
DVVFKEGSHA GVAFDEVEYE MMAAFSTNIG NDDISLAAWL ASLMETYGVD GKEIAWSIAL
VYDCFEHGVI TLEDTGGMSF KWGETADLPE LIDQICTRRG FGATFSDGVK VGAERIGGEA
VNMAVWAGKG NAPHVTDDRG VGVWGFEVTY ACSDNGSFYG SESYDPEVGN NEPTEPFDVE
RIPIAAKNDS VKWVYMDMVG LCMFFAQNQS VLVEAINSVT GWDMTGKELY EAGDRVRALS
RSYNMLCGRT REDDRVSPRM KAANVDGPAK GHCVGDDLDA MIERYLEANE YDVETGKPKP
ELLERLGLGY VVANLWPEHV SA