Gene Shel_04410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04410 
Symbol 
ID8394333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp525768 
End bp526301 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content57% 
IMG OID644985205 
Productacetyltransferase, ribosomal protein N-acetylase 
Protein accessionYP_003142851 
Protein GI257063179 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00197564 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATTTCG AGAGCGACGC GCTGATACTG CATACGCCAA AGAATTCCGA CCTGGTCGGA 
CTGCGGCGCA TCATGAACGA CTCGAAGGTG TATCGGCTCG AGCCCACCTA CCTTCCGGAA
TCGGGTCTCA CCCCCGAAGA AGCCCTGGTC AAATTCCAAA ACCTAGAGCT GGAACGAGAC
CGCCAATGCA TCCTTGGCAT CTACAGGAAA TCCGATCCCG AAACGCTGGT CGGACTTGCT
GAGCTCTACG ACTACAAGCC GTCCGGCAGA ATAATCTCCG TCGGATGCCG CCTGGCCCAG
GACTTCTGGG GGTGCGGCAT CGCCACAAGC TGCGCCGAGG CCATGATCGA GTTCCTCATG
GCCGAAACGC AAGTCAGTCT TATTACCGCC CATTGCATCC CCGAGAACCT GGCGTCTCAG
AAATCCCTGA TGAAAGCCGG ATTCGAACAC CTTCAAACCA AGTATGAGGA CTGGGGGTAC
GCCGAACCGA CCCGCGCCGA CATTTACGCC TACAACATCG AGCGCAATAA CTAG
 
Protein sequence
MHFESDALIL HTPKNSDLVG LRRIMNDSKV YRLEPTYLPE SGLTPEEALV KFQNLELERD 
RQCILGIYRK SDPETLVGLA ELYDYKPSGR IISVGCRLAQ DFWGCGIATS CAEAMIEFLM
AETQVSLITA HCIPENLASQ KSLMKAGFEH LQTKYEDWGY AEPTRADIYA YNIERNN