| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04300 |
|---|
| Symbol | |
|---|
| ID | 8394322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 513257 |
|---|
| End bp | 513961 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644985194 |
|---|
| Product | Ferric reductase like transmembrane component |
|---|
| Protein accession | YP_003142840 |
|---|
| Protein GI | 257063168 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00128485 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0690521 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTCG CAATCACGAT TGTCGTCACG GCGGTTGCGG CCGTTCTGCT GGCGCCGTCG
ATTCGCAAGG CGCCCGCCGC ATGGTACGCC GGGGCCGTCG CCGTGTGCGT GATCTGCGCG
TATCTGATGC TGCATCCCAT GCCCTATCAA GTGTTGCGCG CGTTCGCTTT TGCAGTGCAG
AAGTGCTATG TGGCATTCGG CCTGTTCGCC GTGGTCATGT TCGTGGGCGC CGCTCCCAAA
ACCTCGGTGT TCTTCCACCG TGTCATGCCG GCTCGTGCCG AACTGTCCAT CGTGGCCACA
CTCCTTTCGG GCGGACACAT CGTGCTGTAT ACCATGAATT ATCTGAGCAC GGGTTCGGCT
CTGTTCTCGA CGCCGAAGAT GCTCGTGCCG TTTGCTATGT CCGTCATCGC AGCGGTGGTG
CTCGTCGTGC TGTTCGCCAC ATCTTTCAAG CGCGTGCGCG TCACCATGCC GTTCAACCGT
TGGAAATTCA TCCAGCGATT CGCATACCTT TTCTTCGCGC TGATCATCGT GCATGCACTG
CTGTTCCTGG GGCCGTCGGC CCTGAACGGG TCCGTGCATG CAGCGACCAA TCTGGCCGTG
TACGTGCTTG TGGGTGCTGC GTATGCGGTC GCGCGCATCG CCCGCTATAT GTCCGACAGG
AAGAAGGCTT CCAAGCCGGA AACCCTCGAG GACCTTTGTC GTTAG
|
|---|
| Protein sequence | MELAITIVVT AVAAVLLAPS IRKAPAAWYA GAVAVCVICA YLMLHPMPYQ VLRAFAFAVQ
KCYVAFGLFA VVMFVGAAPK TSVFFHRVMP ARAELSIVAT LLSGGHIVLY TMNYLSTGSA
LFSTPKMLVP FAMSVIAAVV LVVLFATSFK RVRVTMPFNR WKFIQRFAYL FFALIIVHAL
LFLGPSALNG SVHAATNLAV YVLVGAAYAV ARIARYMSDR KKASKPETLE DLCR
|
|---|
| |