| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04280 |
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| Symbol | |
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| ID | 8394320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 510408 |
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| End bp | 512162 |
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| Gene Length | 1755 bp |
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| Protein Length | 584 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644985192 |
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| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003142838 |
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| Protein GI | 257063166 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.517079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.225555 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAAA AAAGCACGGG TTCACTGTCC CGACGTGGCT TTGTCAAAGC CACGGGCGCA
AGCGTACTTG GTGCAGCAGC GGCCGCTGGC GTATTCGGCG TAGTCGGCAA GCCTCAAGCG
GCCATTGCCG AAGAGTCCGC AACGGCAGCT GAAACACCTG GCGTAACTGA TTTTGCCGCA
AACAGCGAAC TGTACATGAA TGCGTTCCCG CAGCCAGTTC GTTACATCCC GGTTATCGAC
GCTCCGACGG ATATCGACCG CCAAGGGCCA ACGGCTTTCG AAGCTCGTGA AATCGATGAG
ACCGAAATCG TTCGCACCGA AGAGACCGAT GTGCTGGTTG TCGGATGCGG CATCACCGGA
TCTTGCGCTG CCCTGTCGGC ATCCGACGAC GGAACCACGC AGGTCTTGTG CCTCGAGAAG
ATGAGCGTTG GCCGCGGCAT GTTCGAAGGC ATGGGCGTTA CCGGTGGACC GCAAATGGAA
GAGGCCGGCT ACGAACTGGA CAAGGCCGAA ATGATGGACC GCATGCGTCA CGCGGCATAT
TACCGCGTAC CGATCGACCC CATCAAGCTT TGGGCAGACC GCAGTCCCGA AGCGGCCGCA
TGGCTTCAAG AGAAGTTTGA CGAGGGCGAA GGCGGCATTA CCACGCACTT CATCGAGAAT
AATCCGAACG CCCACAACTT CGAAGTACCT CAGACAGAAG TGGGGTTCGC ATCCGACCAA
TGGAGCGAGC AGACCACGAA TAATGCGGGC GGCGCTGGAA TCTACATCGT GAAGGACCTG
GCCAACACGT TATCCAAACG CGAAAACGCA GATCTTCGCT ACAATACCCC GGTTGTCAAG
CTTGAGCGTG AAGAGGGCGG TCGCGTCACA GGCGCGATTG CCAAGGATGC TGAGGGTTAC
TTCCGCGTGA ACGCGAGCAA AGGCGTCATC CTGGCAACCG GCGGCTTCGA TGCCAACCCG
CAACTGCTCA AGGCATGGTG CCGCCCCGAA GACATCGCCA ACTGCGCAAG TTGGTGCCCG
AACTACGGCA CCACCGGCGA TGGCCAGCTC ATGGGCCTTG CGGTTGGCGG CCAGATGGAC
CCCCTGCCTG CAGCCATCAT GAACTTCGAT TTCGGCAGCC CCGAGTCGTT CTACTCCAGC
AATCTCGGAA TCACGAGCCT CGTTGCCCAA GGACTCATGA TCAACGAGCA GGGCCGTCGT
TTCGCCAGCG AATCGCTACC TTTCCAGGCT CGCTCTAACG CCATCACGGC CCAACGCCAT
TACGGAGAAA GCTGCTGGCG CGTTGCGTCC AGTGCGCAGG TCGCTGCCCC CACGGTGCTC
GAAGCCCTTG AGCCGTTTAA AGAGAAGAGC TGGGCGTTCG AGGCGGACTC GTTGGAAGAG
CTCGCCGAAA TCATGGAAGT CCCCGCTGAG AACCTTGTTG AAACCGTGGA GCGGTACAAC
GGTTTCGTAG ACAACATGAA GGACGAAGAC TTCAACAAGC CCCTGACAGA AACCTCGGCA
AAAATCGAAG GCGAGAAATA CTATGCCATC AAGCACCAGT CTTCGATTCT GGCCACTGTT
TCAGGTTTGG TCGTCGACTA TTCCTGTCAC GTGTTGGATT ACGACAACGA AGTCATCGAG
GGGCTGTATG CTGCAGGCGG CGCATCGGGT GGTTTCTTCA GCGGCAACTA CCCGCGACAC
ATTTTCGGAC CGTCAATCGG ACGCTGCGTA ACCTTCGGCT ACGTGTCCGG CCAAAACGCT
GCGATGGGGG TGTAG
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| Protein sequence | MAEKSTGSLS RRGFVKATGA SVLGAAAAAG VFGVVGKPQA AIAEESATAA ETPGVTDFAA
NSELYMNAFP QPVRYIPVID APTDIDRQGP TAFEAREIDE TEIVRTEETD VLVVGCGITG
SCAALSASDD GTTQVLCLEK MSVGRGMFEG MGVTGGPQME EAGYELDKAE MMDRMRHAAY
YRVPIDPIKL WADRSPEAAA WLQEKFDEGE GGITTHFIEN NPNAHNFEVP QTEVGFASDQ
WSEQTTNNAG GAGIYIVKDL ANTLSKRENA DLRYNTPVVK LEREEGGRVT GAIAKDAEGY
FRVNASKGVI LATGGFDANP QLLKAWCRPE DIANCASWCP NYGTTGDGQL MGLAVGGQMD
PLPAAIMNFD FGSPESFYSS NLGITSLVAQ GLMINEQGRR FASESLPFQA RSNAITAQRH
YGESCWRVAS SAQVAAPTVL EALEPFKEKS WAFEADSLEE LAEIMEVPAE NLVETVERYN
GFVDNMKDED FNKPLTETSA KIEGEKYYAI KHQSSILATV SGLVVDYSCH VLDYDNEVIE
GLYAAGGASG GFFSGNYPRH IFGPSIGRCV TFGYVSGQNA AMGV
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