Gene Shel_04270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04270 
Symbol 
ID8394319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp509856 
End bp510404 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID644985191 
Producthypothetical protein 
Protein accessionYP_003142837 
Protein GI257063165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.379993 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.356103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGA TTCAGAGAGC ATCGCACACG ACCTCCAAGA ATAAGCTCAC CCTCGTGGCC 
GGTACCATCG GCGCCCTGCT TGTCGCGCTG GCCATTGGCT GCTCGCCTAG CGGCACCAAC
GCAACATCCT CGGATGGCGA TGCTACGGAC TCGGCCACGT TTGACACCGC AAGCTATCAG
CTGCATGTCG AGAACTGCGA CGGCGGCGCG GGTCTTGCCA GCTTTCACAC CGCGCTTGGT
TACGACTGCA CCTCGTGCCA TGGGTCCGAC CTACCCGACC AGCTTTCGGG TATCGAAACC
GAAGATGGCT CCGAGCCTGA ACTGACCAGC ACGTATTTTG TAGACAACGA CAAGTGCTTC
GCTTGTCATG GGACTTGGGA GGACCTGGCC ACGGCAACCG AATCATTGGG GGATTACAAC
CCGCACGACT CCATACATGG CACAGTTCAA TACTGCAACG AGTGTCACAA GGGACATTCC
GAACAAGTAG ACATCTGTGG AGAATGCCAC CCCAACGGTG GGCAGACCAT GCGGGGAACA
GTCTCGTAA
 
Protein sequence
MKRIQRASHT TSKNKLTLVA GTIGALLVAL AIGCSPSGTN ATSSDGDATD SATFDTASYQ 
LHVENCDGGA GLASFHTALG YDCTSCHGSD LPDQLSGIET EDGSEPELTS TYFVDNDKCF
ACHGTWEDLA TATESLGDYN PHDSIHGTVQ YCNECHKGHS EQVDICGECH PNGGQTMRGT
VS