| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04260 |
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| Symbol | |
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| ID | 8394318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 508175 |
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| End bp | 509572 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985190 |
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| Product | putative cell wall binding protein |
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| Protein accession | YP_003142836 |
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| Protein GI | 257063164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.878918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.401989 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACGCG CGTCGACCCG CAATTCCGTT CGCCGTTTCC GCTTGCTGCT GGCCTTCGCT
ATGGCCGTTG TTTTCGCGCT GGGCTTCGGC GTTGCGGGAT GCTCGTCGGA CGGATCGGAT
GAAGGCGCCG ACGAAATCGC CGCGCCCGTC CAGGCGGACT ATTACGGCCA ATGGGTCGTA
TCCTCCATCG AATCCGACGG CGGCGGCAGC GGCATCACGA ACCAAGAGGA GCTCGAATCC
CAGAAGGAAC TCGGAAACGA TACGGTTTTC ACCTTTAACG AAGACGGCTC GGCGACGTTG
ACCCTGTACG GCTCCGATTT CGAAGCCACC TGGGATTATG CGGACTCGGG CGAAAGCACC
GTGGAGGTTT TGGGCGAAAC CTTCGATATG GACGTTTCCG GCAACACCCT CACGCTCACC
AAGGATGACA CGGTATTCAA CTGCAAGCGC TACGGCGCTG CTGCTCCGAC GATCAGCGAC
GAGCGGACGT CGCTTGCCGA CGTGAAAGGG TACGTCGGCG ACCGCCAGAG CCCCGAGCTG
CGTCCCGGCT GGAACGAAAG CGACGGCAAG CGCATCTACG TGAACGAAGA CGGCTCGCTG
CCCGACGGTT GGATGGACGT GGACGGCGCC AAGTACTGCT TCGTGCACGG CGCTCCGCGC
ACGGGCTTGT TCCTGGACGG CGACTACTAC TACTTCACGA ACGAAGAAGG CGCCATGCAG
ACCGGCTGGC AGGACATCGA CATGGACCGC TACTACTTCG ATCAGGAATC CGGTCAGGCG
CTCATCGGCT GGCAGCAGCT CGACGGCGCG TGGTACGCCT TCGACGAGCA GGGCAGGATG
CATACCCAGT GGTACCGCAT CTCTGAGTCC GAAGAGTACT ACATGGGTGA CGACGGCAAG
ATGTGCACCG GCTGGGTGGA CATCGAAGGG TCCTCATACT ATTTCGATGC GAACGGCAAG
CTGCAGAAGG ACACTTGGAT AGGCAACAAC TACGTGAACG AATCCGGCCA GTGGGTCGAG
GGCATCAAGC CGCTGCCCGA CAGCGGCACG GTGTTCGTGG GCGGATCGGG CATCTCATCT
GCCACCGTGG AGGGCAGTAC GGATCGCAAC GCTCTGGTCA AGTTCAAGGA CGGCTCGGGC
AACGAGGTTG CGGTGTTCTT CGTGGGCAAG GGCGAAACCG TGACCGTGAG CATGCCTGGT
GGTTACTACT ATATGTATGT CGCGTACGGC GGCGACCAGT GGTACGGCGA AGACAGCGAA
TACCCCTTCG GCGACGAAAC CACCTTCTCG AAGGATGACG AAGGCGCCGA CTTCTCCAAC
TACACTTGGC AATACACGCT GTATACGGTT TCTAACGGCA ACCTGCACAT GGACTCCATC
GGAGCCGACG AATTCTAG
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| Protein sequence | MSRASTRNSV RRFRLLLAFA MAVVFALGFG VAGCSSDGSD EGADEIAAPV QADYYGQWVV
SSIESDGGGS GITNQEELES QKELGNDTVF TFNEDGSATL TLYGSDFEAT WDYADSGEST
VEVLGETFDM DVSGNTLTLT KDDTVFNCKR YGAAAPTISD ERTSLADVKG YVGDRQSPEL
RPGWNESDGK RIYVNEDGSL PDGWMDVDGA KYCFVHGAPR TGLFLDGDYY YFTNEEGAMQ
TGWQDIDMDR YYFDQESGQA LIGWQQLDGA WYAFDEQGRM HTQWYRISES EEYYMGDDGK
MCTGWVDIEG SSYYFDANGK LQKDTWIGNN YVNESGQWVE GIKPLPDSGT VFVGGSGISS
ATVEGSTDRN ALVKFKDGSG NEVAVFFVGK GETVTVSMPG GYYYMYVAYG GDQWYGEDSE
YPFGDETTFS KDDEGADFSN YTWQYTLYTV SNGNLHMDSI GADEF
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