Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_04240 |
Symbol | |
ID | 8394316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 505155 |
End bp | 506888 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985188 |
Product | hypothetical protein |
Protein accession | YP_003142834 |
Protein GI | 257063162 |
COG category | [S] Function unknown |
COG ID | [COG4715] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0253557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.72499 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA ACTGGCGCGG TGCATTTACC GACCGCATTC TCGAGCGCGG GCGGAATTGC TGGCGCAACG GACAGGTAGC CATCAAAACG GCGAACGACA CCACGTGCTC CGCCACCGTT GCGGGCACGC AGGTCTACAG AGTCAGTGTG CCGATGTCGG GCGCGCTTGC AAGGGCCACG TGCACATGCC CCCATTTCGC GAAGGGGAAC ATGTGCAAGC ACATCGCAGC CGTCCTGTAC GCGTTGGAAG CTGGCGATTC GAACGAGACG TGCGTCGAAT CTCCTGTTCA AGACACTCAG GACATATCGT CCCGCGCCAA TAGGGAGAAC ATTCTCGACA TGATGTCGGA AGATGACCTG CGCGGCTTTG TCCGGGAGCT CATGGGTGAA GACGAGCGCC TGGAGCGTCG GGTTCTCTCT CGGATGGGCG TCGTTGACCT GAAGCAGGCG AAATCCGACC TCCGGAAGCT GACCACCGAT CTCATGCGGA CCTACGAGCA CAGCGGCATG ATTGACTGGA GATATTCGCT GGATTTCGAG AACGAGTATC TGGCAGGCGT TGACGACATC GTCGAGCCGT TCCGGACCAC CCAAGACGTC GACGGGTTGA TGGAGCTTGT CGTCGTCCGT TTAATGCAGC TCCAGCGCAT ACGCATCGAC GATTCGGACG GGTTCTTCTC AACGGCTCTC TACCCTGTTC GAGACGATAT GAAAAAAGCC TTCATCTGGG CAGACGTCAA GCAACGGCGC AAGATGCTCC AAACCCTGAA TAGTTTTCTG CAGAAAAAAC CTGGCACCAA CCGCAACGAC ATGTACTGGT TTTTGGAGGA CTGTGTCCAG GGTTTTCTGC TGGACGCGTT TCCAACCGAT CCGGAACTTG CGCAGGACGT GATCGCCATG GCGGACAGCC GCATCGCCGA GCTGCCCGCG CAGTGCAATG ACCGTGGCTA TGACAGAAAC GGAGCAGACC GTCGTCAATG GAAGATGGGG CGTTTGATGG CGCTGTCCAG CACGGATGCG TCCTTCGACG AGCTGACTGA AGCCGCTGAT GAATTGCTTG GCGAAGCGAA GGCGGTACGT GTGCTTTCGG ATGCGCTTTT GCGAGAGGGC AGGGTCGACG AGGCGTTGGG GATGTTGCGG GACAACGTCG ACGCTTTCGA CGAGCGGCGT AGGGGAGACG ATCGGCCGCC CCGTGTGGTT GACCGACTCA TCGAGCTGAC TGAGCAGTAC AAACCCGTAG CCGAGCGAGA GGTGTTGCTG ACTTGGCTTT TACAGAATCC TCCGGGCAAA TGCTCCGCGA AAGACTTAGA GACATGGTAT GACGCGCTGC ATGGGTTGAC GGGCGAACAA TCCTGGTCGC AGACGCGCGG GGCCTTGATG GCGACGATGC CGGCGGGTGC GAAGCAGACG TGCCTGGCGC ACGAGGACTC TTTAGACGAG CTGTACGAGT GCATCATGGC AGATGGCGGC GGGGATTTGT GGAAATACGA AAGCTTGCTT TCCGATCGGT ATCCGCAGGC TTACCTCGAG TTGTATTTGG ATCAGGCACG CTTCGAACTG AATAATTCGC GCGATCGTCG GGAATATAAC CGGGCGGCGC GTGCCCTGAA GAAAGTGGTG GCCTTCGAAG GTGGGTTCGA AATCGCCCAG GCCGAGGCTG AGGCGGTCGT CGCGGCAAAC CCGCGCAAGA CTGCTCTGGC CGATGAGCTG CGCAAAGTTG GGTTTGCGGT CTAG
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Protein sequence | MIENWRGAFT DRILERGRNC WRNGQVAIKT ANDTTCSATV AGTQVYRVSV PMSGALARAT CTCPHFAKGN MCKHIAAVLY ALEAGDSNET CVESPVQDTQ DISSRANREN ILDMMSEDDL RGFVRELMGE DERLERRVLS RMGVVDLKQA KSDLRKLTTD LMRTYEHSGM IDWRYSLDFE NEYLAGVDDI VEPFRTTQDV DGLMELVVVR LMQLQRIRID DSDGFFSTAL YPVRDDMKKA FIWADVKQRR KMLQTLNSFL QKKPGTNRND MYWFLEDCVQ GFLLDAFPTD PELAQDVIAM ADSRIAELPA QCNDRGYDRN GADRRQWKMG RLMALSSTDA SFDELTEAAD ELLGEAKAVR VLSDALLREG RVDEALGMLR DNVDAFDERR RGDDRPPRVV DRLIELTEQY KPVAEREVLL TWLLQNPPGK CSAKDLETWY DALHGLTGEQ SWSQTRGALM ATMPAGAKQT CLAHEDSLDE LYECIMADGG GDLWKYESLL SDRYPQAYLE LYLDQARFEL NNSRDRREYN RAARALKKVV AFEGGFEIAQ AEAEAVVAAN PRKTALADEL RKVGFAV
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