Gene Shel_04240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_04240 
Symbol 
ID8394316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp505155 
End bp506888 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content59% 
IMG OID644985188 
Producthypothetical protein 
Protein accessionYP_003142834 
Protein GI257063162 
COG category[S] Function unknown 
COG ID[COG4715] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0253557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.72499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGAAA ACTGGCGCGG TGCATTTACC GACCGCATTC TCGAGCGCGG GCGGAATTGC 
TGGCGCAACG GACAGGTAGC CATCAAAACG GCGAACGACA CCACGTGCTC CGCCACCGTT
GCGGGCACGC AGGTCTACAG AGTCAGTGTG CCGATGTCGG GCGCGCTTGC AAGGGCCACG
TGCACATGCC CCCATTTCGC GAAGGGGAAC ATGTGCAAGC ACATCGCAGC CGTCCTGTAC
GCGTTGGAAG CTGGCGATTC GAACGAGACG TGCGTCGAAT CTCCTGTTCA AGACACTCAG
GACATATCGT CCCGCGCCAA TAGGGAGAAC ATTCTCGACA TGATGTCGGA AGATGACCTG
CGCGGCTTTG TCCGGGAGCT CATGGGTGAA GACGAGCGCC TGGAGCGTCG GGTTCTCTCT
CGGATGGGCG TCGTTGACCT GAAGCAGGCG AAATCCGACC TCCGGAAGCT GACCACCGAT
CTCATGCGGA CCTACGAGCA CAGCGGCATG ATTGACTGGA GATATTCGCT GGATTTCGAG
AACGAGTATC TGGCAGGCGT TGACGACATC GTCGAGCCGT TCCGGACCAC CCAAGACGTC
GACGGGTTGA TGGAGCTTGT CGTCGTCCGT TTAATGCAGC TCCAGCGCAT ACGCATCGAC
GATTCGGACG GGTTCTTCTC AACGGCTCTC TACCCTGTTC GAGACGATAT GAAAAAAGCC
TTCATCTGGG CAGACGTCAA GCAACGGCGC AAGATGCTCC AAACCCTGAA TAGTTTTCTG
CAGAAAAAAC CTGGCACCAA CCGCAACGAC ATGTACTGGT TTTTGGAGGA CTGTGTCCAG
GGTTTTCTGC TGGACGCGTT TCCAACCGAT CCGGAACTTG CGCAGGACGT GATCGCCATG
GCGGACAGCC GCATCGCCGA GCTGCCCGCG CAGTGCAATG ACCGTGGCTA TGACAGAAAC
GGAGCAGACC GTCGTCAATG GAAGATGGGG CGTTTGATGG CGCTGTCCAG CACGGATGCG
TCCTTCGACG AGCTGACTGA AGCCGCTGAT GAATTGCTTG GCGAAGCGAA GGCGGTACGT
GTGCTTTCGG ATGCGCTTTT GCGAGAGGGC AGGGTCGACG AGGCGTTGGG GATGTTGCGG
GACAACGTCG ACGCTTTCGA CGAGCGGCGT AGGGGAGACG ATCGGCCGCC CCGTGTGGTT
GACCGACTCA TCGAGCTGAC TGAGCAGTAC AAACCCGTAG CCGAGCGAGA GGTGTTGCTG
ACTTGGCTTT TACAGAATCC TCCGGGCAAA TGCTCCGCGA AAGACTTAGA GACATGGTAT
GACGCGCTGC ATGGGTTGAC GGGCGAACAA TCCTGGTCGC AGACGCGCGG GGCCTTGATG
GCGACGATGC CGGCGGGTGC GAAGCAGACG TGCCTGGCGC ACGAGGACTC TTTAGACGAG
CTGTACGAGT GCATCATGGC AGATGGCGGC GGGGATTTGT GGAAATACGA AAGCTTGCTT
TCCGATCGGT ATCCGCAGGC TTACCTCGAG TTGTATTTGG ATCAGGCACG CTTCGAACTG
AATAATTCGC GCGATCGTCG GGAATATAAC CGGGCGGCGC GTGCCCTGAA GAAAGTGGTG
GCCTTCGAAG GTGGGTTCGA AATCGCCCAG GCCGAGGCTG AGGCGGTCGT CGCGGCAAAC
CCGCGCAAGA CTGCTCTGGC CGATGAGCTG CGCAAAGTTG GGTTTGCGGT CTAG
 
Protein sequence
MIENWRGAFT DRILERGRNC WRNGQVAIKT ANDTTCSATV AGTQVYRVSV PMSGALARAT 
CTCPHFAKGN MCKHIAAVLY ALEAGDSNET CVESPVQDTQ DISSRANREN ILDMMSEDDL
RGFVRELMGE DERLERRVLS RMGVVDLKQA KSDLRKLTTD LMRTYEHSGM IDWRYSLDFE
NEYLAGVDDI VEPFRTTQDV DGLMELVVVR LMQLQRIRID DSDGFFSTAL YPVRDDMKKA
FIWADVKQRR KMLQTLNSFL QKKPGTNRND MYWFLEDCVQ GFLLDAFPTD PELAQDVIAM
ADSRIAELPA QCNDRGYDRN GADRRQWKMG RLMALSSTDA SFDELTEAAD ELLGEAKAVR
VLSDALLREG RVDEALGMLR DNVDAFDERR RGDDRPPRVV DRLIELTEQY KPVAEREVLL
TWLLQNPPGK CSAKDLETWY DALHGLTGEQ SWSQTRGALM ATMPAGAKQT CLAHEDSLDE
LYECIMADGG GDLWKYESLL SDRYPQAYLE LYLDQARFEL NNSRDRREYN RAARALKKVV
AFEGGFEIAQ AEAEAVVAAN PRKTALADEL RKVGFAV