| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04230 |
|---|
| Symbol | |
|---|
| ID | 8394315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 503634 |
|---|
| End bp | 504842 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644985187 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_003142833 |
|---|
| Protein GI | 257063161 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.389305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.67881 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGCA CGGCAGGGGC GCCGGCGTTC GCCGGCGTCG ACACCCACAA GGAGACGAAC
ATGCTGGCCC TCAAGGACGG GCTCGGCCGC ACGGTCGGAA TCTGGGAGTT CCCGGCGAAC
CCCGCCGGCT ACGACGCGCT CGCCGACGCG ATCGGCGACA CCTCCGTGCC GGTCGGCGTC
GAGGGCGCCC GGTCCTACGG CGCGGGCCTC GCGCAGAGGC TCGCCGAGCT CGGCTACGAG
GTCCGCGAGG TCGTCAGGCC GCGCCGCGAG CAGCGCCGCC GCGGCAAGAC CGACGAGATC
GACGCGCTGG CGGCGTGCGA CAACCTGGCC GCCGGCAGGA GCATGCCCGC CAAGGAGATG
GAGGGGGGCG CCGCGGCCCT GCGCTGGCTG ATGGTCGCCC GCGAGCAGGA GGTCGCCCAC
ATGACGAGGC TCGCCTGCTG CATGGACTCC ATGCTGGTCA CGGCGCCCTA CGGCGTCCGC
GAACGGTGGC GCGGCCTCGA AGGCGCCGCC CTGATGCGGG CCGTCGCCGC GGGCAGGCCC
AAGGACGCGG CCGGCCGCAC GATGAGGGAG GTCGCGAAAA GCTGGCTGGG GGCCGAGGCG
CGCGCGGGCA GGCTCGAGGC GGAGATCCTG GAGCTGATGG CGCGCTCGTA CCCCGCCCTG
ATCGGCGCGC CGTGCGTCGG CGCGATCAGC GGCGCCCGCA TCGTCCTGGC CGCCGGGTCC
AACCCGTCCC GCCTGGGCGG CGAGGCCGCC TTCTCGATGC TCTGCGGCAC CTCGCCCGTG
CCCGCGTCGT CGGGCAACAC CGTCCGGCAC CGCCTGAACC GGGGCGGCAA CCGCCAGGCC
AACCGGGCCG TCCACGAGAT CGCCCGCGCG AGGATGTCCC ACGACCCGCG CACGAAGGCC
TACATCGCGC GGAAGATGTC GGAGGGCAAG ACCAAGCGCG AGGCCGTCCG CTGCCTGTGC
CGCTACATCG CCCGCGAAAT CTACCGCCTG CTCACGGGCC CGCAGGAGCC CCCCTGCGAC
CAGTCCGCCC TCGCGGAGAG GCGCAAGGCC TGCGGCCTGA CCCAGAGGCA GGCGGCGGAG
GGCGCGGGAA TCACGAGGGC GAAGGTCGGT GGGCTCGAGA GGCTCGCCGA GTTCGACACC
GAATCGCTGC TGAGATACGA CGCGTTCCTA AGGGAGGTGG AGGCGGAAAA GGGGCTTGAC
AGCATATAG
|
|---|
| Protein sequence | MECTAGAPAF AGVDTHKETN MLALKDGLGR TVGIWEFPAN PAGYDALADA IGDTSVPVGV
EGARSYGAGL AQRLAELGYE VREVVRPRRE QRRRGKTDEI DALAACDNLA AGRSMPAKEM
EGGAAALRWL MVAREQEVAH MTRLACCMDS MLVTAPYGVR ERWRGLEGAA LMRAVAAGRP
KDAAGRTMRE VAKSWLGAEA RAGRLEAEIL ELMARSYPAL IGAPCVGAIS GARIVLAAGS
NPSRLGGEAA FSMLCGTSPV PASSGNTVRH RLNRGGNRQA NRAVHEIARA RMSHDPRTKA
YIARKMSEGK TKREAVRCLC RYIAREIYRL LTGPQEPPCD QSALAERRKA CGLTQRQAAE
GAGITRAKVG GLERLAEFDT ESLLRYDAFL REVEAEKGLD SI
|
|---|
| |