| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04140 |
|---|
| Symbol | |
|---|
| ID | 8394306 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | - |
|---|
| Start bp | 493138 |
|---|
| End bp | 493977 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644985178 |
|---|
| Product | 1,4-Dihydroxy-2-naphthoate synthase |
|---|
| Protein accession | YP_003142824 |
|---|
| Protein GI | 257063152 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0447] Dihydroxynaphthoic acid synthase |
|---|
| TIGRFAM ID | [TIGR01929] naphthoate synthase (dihydroxynaphthoic acid synthetase) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.940341 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.842204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA TTTGTTGGGA AGCGGCCAAA ACGTACCGCG AAATCGTGTA CGAGAAGGCC
GAAGGCATCG CGAAGATCAC CATCAACCGG CCCGAACGAA GAAATGCGTT CACGCCCCTC
ACCGTCGTTG AGCTCATCGA CGCGTTCAGC GACGCACGGG ACGACTCAAG CGTCGGCGTC
ATCCTACTCA CGGGCGCGAA CCACGGAGGC GCCCACGAGG ACGAGGCCTT CTGCTCCGGC
GGCGACCAGA AGATCCGCGG CAACGGCGGC TACGTGGGCG AGGACAGCAT CCCCCGCCTG
AACGTGCTGG ACCTGCAGCG CCTGATCAGG GTCATCCCGA AACCCGTGAT CGCCATGGTC
AACGGCTACG CCGTGGGCGG CGGGCACGTG CTGCACATCC TGTGCGACCT GTCGATCGCC
GCCGAAACGG CGAAGTTCGG CCAGACCGGC CCCCGCGTGG GCAGTTTCGA CGCGGGCTAC
GGCGCGGGAT ACCTGGCGGA CATCGTCGGC CAGAAGAAGG CCCGCGAAAT CTGGTACCTG
TGCCGGCTCT ACACCGCCCA AGAGGCGCTG GACATGGGCC TGGTCAACAA GGTGGTCCCC
TTCGACGAGC TGGAAGACGA GTGCGTGAGC TGGGCAAAGC AGATTCTCAG GCACAGTCCC
ACAGCACTTC GCTTCATGAA GGCATCGTTC AATGCGGCCA CCGACGGCCT GGCCGGGCTG
CAACAGCTCG CCGGCGACGC GACGCTTCTG TTCTACACCA CCGACGAGGC CAAAGAGGGC
CGCGACGCGT TCAAGGAGAA GCGCGACCCC GACTTCGACC AGTTCCCCAG GTTTCCCTAA
|
|---|
| Protein sequence | MTDICWEAAK TYREIVYEKA EGIAKITINR PERRNAFTPL TVVELIDAFS DARDDSSVGV
ILLTGANHGG AHEDEAFCSG GDQKIRGNGG YVGEDSIPRL NVLDLQRLIR VIPKPVIAMV
NGYAVGGGHV LHILCDLSIA AETAKFGQTG PRVGSFDAGY GAGYLADIVG QKKAREIWYL
CRLYTAQEAL DMGLVNKVVP FDELEDECVS WAKQILRHSP TALRFMKASF NAATDGLAGL
QQLAGDATLL FYTTDEAKEG RDAFKEKRDP DFDQFPRFP
|
|---|
| |