| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04080 |
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| Symbol | |
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| ID | 8394300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 486777 |
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| End bp | 487787 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644985172 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003142818 |
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| Protein GI | 257063146 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.751374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.628914 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA CCGAACTGAT GTCGAAATAC GAACCGGGCG ACATGCGGAA CTTCGCTTCG
CAGCCCGAAT CAGGATCCTG TCAAGTATCG GAAGCTCGAA AGTGTCTTGA AGCAGGACTC
CGCGCAGCGA CGAACGAAGT TGCTCCTGAC TTCGATGCGG CCCTGGCCTA CTTTCTCGAA
GGCGCCTCAA TGGGCGATTC CGATTGTCAA TACCAGGCCG CATGCCTTCT CGACACGAAC
GGGGCGTTTG CAAACCGCCG TAGCGAATGC GTTCCCCTGT ATGAGCGCGC GGCCGCCGCG
GGTTTTGCGG ATGCGCAGGC CGACCTGGCC CTTCTGTATT TGTCGGGCGA CTTGGTAGAC
AGGAATCCCG CGCAGGCCGT CAGCCTTCTC GAAACCGCCG CAGCGCAGGG AAACTCCGCC
GCCCAGTACA ATCTGGCGTT GATCAACCGC GACGGTGAAG ACGGGATACC GGCGAATCCG
ACAAAGGCGT TTCACCTGTT CAAGGCGGCC GCAGACCAGG GCGATGCCGA TGCGCTGCTG
ACGGTGGCCG ATATGCTGCA TGCAGGCAAC GGCGTCGAGA AAAACCTCGA GGAAGCGGCC
CGCCGGTACC GCGCGGCTGC GGAGCTTGGA AGCGCAGAAG CGGCATACAA GCTGGGCATC
ATGTTCATGA CGGATGATTT CGAGGCGGAA TACGGGGACG GCTACACTAA CGCGTTCGAC
GGCTCGATGT TCTGGCTTCG CAAGGCCGCG GAGCAAGACT GGCCGGATGC GTTCATGCCG
CTGACCGAGT GCATGGATCT GTCCGATCCG CTCGAAGAGC TGTATTCGGC ATCGGACTAC
GCTCATTGGT ACCGCAAGGC CGCCGAGCTG GGCAATCCGG AAGCCATGCG ATGCCTGGCC
TACGTGATTT CTGAAACGGA TCCCGACGAA GCCCAGCGCT GGTACCGCAA GGCCGCTGAC
CTTGGAGATG CGTCGGCGGA AACATGGCTG AAGAAGCATC GGTTGTTATA G
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| Protein sequence | MNETELMSKY EPGDMRNFAS QPESGSCQVS EARKCLEAGL RAATNEVAPD FDAALAYFLE
GASMGDSDCQ YQAACLLDTN GAFANRRSEC VPLYERAAAA GFADAQADLA LLYLSGDLVD
RNPAQAVSLL ETAAAQGNSA AQYNLALINR DGEDGIPANP TKAFHLFKAA ADQGDADALL
TVADMLHAGN GVEKNLEEAA RRYRAAAELG SAEAAYKLGI MFMTDDFEAE YGDGYTNAFD
GSMFWLRKAA EQDWPDAFMP LTECMDLSDP LEELYSASDY AHWYRKAAEL GNPEAMRCLA
YVISETDPDE AQRWYRKAAD LGDASAETWL KKHRLL
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