| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04060 |
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| Symbol | |
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| ID | 8394298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 482672 |
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| End bp | 483490 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644985170 |
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| Product | hypothetical protein |
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| Protein accession | YP_003142816 |
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| Protein GI | 257063144 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.151575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCACCA ATCGGCTGGA GGACCCCATG CCCAACATCG AGTACACCAT GGCGAAGGCC
CGCAAGCTGC TGCCCATCAT CTATGTGATA GATACGTCCG GCTCGATGAA TTTCTACGGG
CGCATATCAG CCGTCAACAG GGCCATGAAC GAGACGTTGG ACGTGCTTGG GGACGTGGCC
GCGAAGAATC CCACCGCCGA CGTCAAGGTT GCCGTGCTTG GGTTCTCTAC GGGTGCGGAA
TGGATTACCA CCGACCCGGT GACGGGCAAG CCGGCGCTTA TGGACCTGGA GGATTTCTAT
TGGGACAAGC TGAAGGCCCG TGGGTCCACC GACCTGGGTG CGGCCCTCAT CGAGCTGGGC
GAGCAGCTCA CGCGCGATGC GATGCTGGTC AGCGAGACCG GGTTCAAGGT TCCAGTCATC
ATCTTCATGA GCGATGGCGG GCCCACCGAC GATTGGGAAA GCGCCTTCGA GAAGGTGTGC
GCAAACAACC GCTGGGTGCG GGCCGCCACC AAGATAGCCC TGGCCGTGGG CGACAACGCC
GATAGGGAAG TGCTTGCCCG CATCGCCGAC GGCAACCCCG AGGCCGTGGT TCCCGTTTCC
GACAGCGCCA CGCTGCAAAA GCTCATCAAG GTGGTTTCCG TAACGGCGTC CATGATCAAC
GGCAGAAGCC GCACGAGCGA CAGCAACCAG AACGATATCG TCAACGCGGT CCGCACCGAG
ATGGGCATGA CCGTCCGGCC TGAACCCGAG CGAACGGATA CGGCGGACAT TTCCGGTAAC
GACGAGGTTT GGGACGACCT CGACGACAGC TGGGCATAA
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| Protein sequence | MCTNRLEDPM PNIEYTMAKA RKLLPIIYVI DTSGSMNFYG RISAVNRAMN ETLDVLGDVA
AKNPTADVKV AVLGFSTGAE WITTDPVTGK PALMDLEDFY WDKLKARGST DLGAALIELG
EQLTRDAMLV SETGFKVPVI IFMSDGGPTD DWESAFEKVC ANNRWVRAAT KIALAVGDNA
DREVLARIAD GNPEAVVPVS DSATLQKLIK VVSVTASMIN GRSRTSDSNQ NDIVNAVRTE
MGMTVRPEPE RTDTADISGN DEVWDDLDDS WA
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