Gene Shel_03910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03910 
Symbol 
ID8394283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp464739 
End bp465536 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID644985155 
Productpredicted nucleotidyltransferase 
Protein accessionYP_003142801 
Protein GI257063129 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.125701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.806026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTCC GGGAACGAAC GGAGACGCAT ATGGACTCGA TGACAACCAC GATTCTCGAC 
GAGCTTCAAA CCGTCGAACG CGAACACGGC GTGCGGGTGC TTGCGGCCAT CGAGTCGGGC
AGCCGCGCAT GGGGCTTCGA CTCGCCGGAC AGCGACTACG ACGTGCGCTT CGTCTACGTG
CATCCCGTCG AAAACTACCT GCGTTTGGAC CAGGGCCGCG ACACCATCGA GTGGAAGCTC
GACGACGTGC TGGACATCAA CGGCTGGGAC CTGGCGAAAT TCCTCCGCCT TGTGCACGCA
TCCAATCCAT CGGCCTTCGA GTGGCTGGGT TCGCCCATCG TCTACCGCGA ATCGCCCGAG
TTCGCGGCGG TGCGTCAGGT GGCGCCGACG TGCTTCTCGC CGCTGGCCAG CGTGCACCAC
TACCTGGGCA TGGCCAAAAC CAACGCGGCG GCGCTTTCTG GGGACGCTGT CAAGTTGAAG
AAGTATCTTT ACGTCATGCG GGCGCTGCTT GCCGCGCGAT GGGCCGTCCA AAAGGCCACG
CCCGTGCCGA TGCTGTTTGA GGATTTGGCG AATGCCCTGC TTGAGCCCGA GATGCGCGGC
GTGGTCGCTG GCATGCTCGC CGAAAAACGT GTGGGTGACG AACGCGAGCT CCATGCGCGC
ATTCCCGAAG TGGATGCGTG GATCGTTTGC GCCCGCGCCG ATCTGGAAGA GCGTTGCGCC
CGGGTGACCG CCCTCCCGAA ACCCAATTGG GATGCTCTTG ACCAGGTGTT TGTCTCAATT
GTGATGGGGG AGCGTTAG
 
Protein sequence
MGVRERTETH MDSMTTTILD ELQTVEREHG VRVLAAIESG SRAWGFDSPD SDYDVRFVYV 
HPVENYLRLD QGRDTIEWKL DDVLDINGWD LAKFLRLVHA SNPSAFEWLG SPIVYRESPE
FAAVRQVAPT CFSPLASVHH YLGMAKTNAA ALSGDAVKLK KYLYVMRALL AARWAVQKAT
PVPMLFEDLA NALLEPEMRG VVAGMLAEKR VGDERELHAR IPEVDAWIVC ARADLEERCA
RVTALPKPNW DALDQVFVSI VMGER