| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03870 |
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| Symbol | |
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| ID | 8394279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 457405 |
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| End bp | 459039 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644985151 |
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| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
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| Protein accession | YP_003142797 |
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| Protein GI | 257063125 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.483354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAGGG TTGTTGTCAT AGGAAGCGGC ATTGCAGGGT GCGCGTGCGC CGTTCGTCTT
GCCGAAGCAG GCGTGCATGT GACGCTCATT TCGCCGTTTC CCTCGGAACG TTCGCAGTCC
GTCATGGCCG CCGGCGGGAT CAACGCCGTG TTGGAAAACT GCGAGGCGGG CGACAGCGTT
GCCGGCCACA TCGACGACAC CATGCGCGGC GGGCGCGGCA TCGCGGGCCG GGCTGCGGTC
GGGTCGCTGT GCGAGCATGC GTCCGACGTG GTCGAATACC TCGAGCGCAT CGGAACGGTG
TTCACGCTGG ACAAGGATGG TTCGCTTGCG CGGCGCGCGT TCGGCGGCCA AACGCACAGG
CGCACGTACT ACTGCGGATC GTCGACGGGA AAGCAGATCG TGTCGGCGCT GGTGATGGAG
GTCAGGCGCT TCGAGGCGCG CGGGCTTATC CAGCGCAGGC TCTGGAGCTG CTTCCATTCG
GCCCTCATAC AGGACGGCCG CTGCCACGGC GCCATCCTGT TCGACGAGGC GAGCGGCGGT
TTGACAATGG AGCTTGCCGA CGCGCTGGTC GTGGCGACGG GCGGGCAGAA CGCGCTGTTC
GGGAAGACGA CCGGTTCCAC CCAATGCGAC GGGTATGCGG CAGGAAAACT CTTCATGCAG
GGGGTCGACC TCAAGAACCT CGAATTCATC CAATACCACC CCACTACGCT CGAGACCCCG
CAGAAGCGCA TACTGGTTTC GGAGGCCGTG CGCGGCGAAG GCGGGCGGCT CTTCTATCTG
GACGGCGACG AGCGCGTGTA CTTTATGGAA GAGAAGTACG GCGAACGCGG CAACCTTATG
CCGCGCGACG TTGTGAGCCA ACAGATGGCT GCAGTCGGAC GTCAGGTCTA CCTCGATGCC
ACCGTGCTTG GCAAGCGCGT TATTGACGAG CGGTTGTCCG AGGTCAGAGA CGTGTGCCGG
AAGTATCGCG GCATCGACAT CGCCAAAGAG CCCATTCCTG TGGCGCCGTC CGTTCACTTC
TTCATGGGTG GCATCGCCGT CGACAACAGC CACGAGACGA ACGTCGAGAA CCTGTTCGCC
ATCGGCGAGT GCGCGTCGAT GTACCATGGC GCCAACCGGC TGGGCGGCAA CTCGCTGCTG
TCCGCTATAT ACAGCGGCTG GGTGGCGGCA GATGCCATTG CGGGCTGCGA TTCGGTCCGA
ACGGCGCCCG ATTTCTCGAC GTTGCTTTCC GAGGAGAGCC GAAAACTGGC GCGCATGTGC
GATGCCTCGG GCACGGTTCC AGCCGCGCGC GTGCGCGACG TGCTCACGGA AACCATGGAC
CGGAAGATGG GCGTTGTACG CGACGGCACG GCGCTTGCAG ACGGCGTGGC CGATATCGAC
CGGTGCCTTT CCGACGTGGA CAAGATAAGC TACGACCCTC ACGTCATGAT GTACATGAAT
TACTGTTTAC CAGGTCTTTT GGTGCTTGCG CGAGCGGCGC TTGCGTGCGC GGAACATCGT
ACGGAGAGCC GAGGGGCGCA TGTGAGAAGC GACTATCCCG CCGCTCGGGA CGATTTCGCG
TTCGCGAGCA TCGTTTCGTA CAACGAAGGC GAGTTCAAGG TGTGGCTGGA CAAGGACGGG
CGCTATGAAC GTTAG
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| Protein sequence | MDRVVVIGSG IAGCACAVRL AEAGVHVTLI SPFPSERSQS VMAAGGINAV LENCEAGDSV
AGHIDDTMRG GRGIAGRAAV GSLCEHASDV VEYLERIGTV FTLDKDGSLA RRAFGGQTHR
RTYYCGSSTG KQIVSALVME VRRFEARGLI QRRLWSCFHS ALIQDGRCHG AILFDEASGG
LTMELADALV VATGGQNALF GKTTGSTQCD GYAAGKLFMQ GVDLKNLEFI QYHPTTLETP
QKRILVSEAV RGEGGRLFYL DGDERVYFME EKYGERGNLM PRDVVSQQMA AVGRQVYLDA
TVLGKRVIDE RLSEVRDVCR KYRGIDIAKE PIPVAPSVHF FMGGIAVDNS HETNVENLFA
IGECASMYHG ANRLGGNSLL SAIYSGWVAA DAIAGCDSVR TAPDFSTLLS EESRKLARMC
DASGTVPAAR VRDVLTETMD RKMGVVRDGT ALADGVADID RCLSDVDKIS YDPHVMMYMN
YCLPGLLVLA RAALACAEHR TESRGAHVRS DYPAARDDFA FASIVSYNEG EFKVWLDKDG
RYER
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