Gene Shel_03800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03800 
Symbol 
ID8394272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp453123 
End bp453521 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content63% 
IMG OID644985144 
Productconserved hypothetical protein TIGR00149 
Protein accessionYP_003142790 
Protein GI257063118 
COG category[S] Function unknown 
COG ID[COG0432] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00149] secondary thiamine-phosphate synthase enzyme 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT TCCAGCTGCA AACGTCTGCG TTTTCGTTTC ACGACATAAC TGCCCAGGTG 
AAACAGGCCG TGCGCGAAAG CGGGGTTCGC GAGGGGCTGT GCACCGTGTA CTGCCCGCAC
ACGACCGCAG CCATCACCAT CAACGAGAAC GCCGATCCCG ACGTGCAGCG CGACCTGAAG
TTCGCCCTGA TTGACGCGTT CGGCGACCGC GACCGTCCCG AGTTCCGCCA CGCCGAGGGC
AACAGCCATG CGCACCTGAA GTCCAGTCTG ATAGGTGCGT CCGAGACCAT CCCCATCAGC
AACGGTTCGC TCACGTTGGG CACTTGGCAG GGCATCTACT TCTGCGAGTT CGACGGCCCG
CGCAGCCGCC GGTTCTTCGT GCAGATCGTG GGGGAGTAG
 
Protein sequence
MKTFQLQTSA FSFHDITAQV KQAVRESGVR EGLCTVYCPH TTAAITINEN ADPDVQRDLK 
FALIDAFGDR DRPEFRHAEG NSHAHLKSSL IGASETIPIS NGSLTLGTWQ GIYFCEFDGP
RSRRFFVQIV GE