Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_03750 |
Symbol | |
ID | 8394267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 447323 |
End bp | 448036 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985139 |
Product | ABC-type multidrug transport system, ATPase component |
Protein accession | YP_003142785 |
Protein GI | 257063113 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.591537 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCTT GCATTTTGGA AACGCGCGGC CTGGTCAAAC GGTTCGGCCG CGGCTCCCGC GAGCAGACGG CCGTGGACGG CGTAAGCCTG CACGTGGAGG AGGGGAAGGT CTATGGCTTG CTCGGCCCCA ACGGCGCCGG CAAGTCGACC ACACTTAAAA TGATCACGGG TATGCTCCGA CCGTCGGAAG GCCAGATTCT GTTCGAGCAG CGCCCCTGGC AGCGAAACGA CCTTTACCGC ATCGGCTCGC TCGTCGAACA GCCGCCGCTT TACCCCAACC TCACAGCCCG CGAAAACATG CGGGTACGCA CGACGATGCT GGGGTTGCCA GATGAAAGGA TCGACGAGGT CCTTTCAACC GTGGGACTTG CCGACACGGG AACCAAGCGG GCAGACCGCT TCTCCATGGG CATGAAGCAG CGCCTGGGAA TCGCCCTTGC TCTGCTCACG CAGCCTAAGC TTCTGATCTT GGACGAACCG ACCAACGGTC TCGACCCAAT CGGTATCGAA GAGCTTCGCA TCATCATCAG GGAATTCCCG AAGCACGGCA TCACTGTGCT TTTGTCCAGC CACATCCTTA ACGAGGTGCA GCAGACCGCC GATTCGGTCG GCATCATCGT GAACGGCCGA CTCGCCTACG AGGGCGCGCT GCAGAAGGAA CAGGACCTCG AAGCCCTGTT CATGGAGGTT TGCAGGAACG GAGATGCGCG ATGA
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Protein sequence | MNSCILETRG LVKRFGRGSR EQTAVDGVSL HVEEGKVYGL LGPNGAGKST TLKMITGMLR PSEGQILFEQ RPWQRNDLYR IGSLVEQPPL YPNLTARENM RVRTTMLGLP DERIDEVLST VGLADTGTKR ADRFSMGMKQ RLGIALALLT QPKLLILDEP TNGLDPIGIE ELRIIIREFP KHGITVLLSS HILNEVQQTA DSVGIIVNGR LAYEGALQKE QDLEALFMEV CRNGDAR
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