Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_03390 |
Symbol | |
ID | 8394231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 410439 |
End bp | 411923 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644985108 |
Product | transposase |
Protein accession | YP_003142754 |
Protein GI | 257063082 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.309069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCA TGTCCAAAGT TCAGGATATA CGAAGGATGC GAAGGGAGGG TGAATCCATA GCGGGAATAT CGAGGGCGAC GGGCGTTTCG GAGCCGACCG TGCGCAAGTA CCTCAAGCCG CAGGATCTCT CCCCGAAGAT GCCCGTGAGG GCGAAGGGGC CGTCGGTGAT GGACGAGTAC TCGTCGATCG TCGACTCGTG GCTCGAGGCC GACCGTGGCG TTTGGCACAA GCAGCGCCAC ACCGCCCAGC GCGTCTGGGA ACGGCTCGTC GAGGAGGAGG GAGCGACGAT GTCGTACAGC ACCGTCAGGC GATACGTCAA GGATTGGAAG GACGCGCACA AAGGCGAAGG CGACGGGTTC CTCGACCAGG TCGGGCTTCC CGCCGACATG CAGGTCGACT TCGGCCAGGC CGATTTCTAC GTGGTCGGCG TGCGGACCCG TCTGCACCAC CTGGTCTGCG ACTTCCCGTT CTCCAACATG GGGCTGGCGC AGGTTTTCCC CGGCGAGAAC GCCGAGTGCG CGTGCGAGGG CCTGATGGCC GTGTTCTCCT ACATCGGCGG TGTTCCCAGG CGCATCATCT TCGACAACGC CACCGGCGTC GGGCGCAAGA TGTGCGGCGT CATCAGGACC TCGAAGCTGT TCGCCGCGTT CGCCGCCCAC TTCGGCTTCG AGTACGTGTT CTGCAACGCG GACGCGGGAA ACGAGAAGGG CGGCGTCGAG AACAAGGTGG GCGCGCTGCG CCGCCGGCTG TTCGTCCCGC TGCCGCACTT CGACAACATC CGGTCCTACA ACGCGCGGCT GCTGGACAAG TGCACGGAGC TCGCGGACAA GGAGCACTGC GTCAAGGGCG AGCCGGAATC CCAGCTGTTC ATGGAGGACC GCTTCGCGCT GCTGCCGCTG CCCGACGCGC CGTTCAAGGC GGTGAGCTGG CAGAGGATGA AGGCCGACAA GTACGGCAAC GTCGTGCTCG ACGGGCGCCA CCGCTACTCG AGCGCGCCCG AGTTCGGCGG GCGCGAGCTC ATCGTGGGCA GGTGCGCCTT CGACGTCGAG ATATACGATT CCGACGGCGC GCGCGTAGCG ACGCACGCGC GCGCCTACGG CGACCGCCCC ACCGAGTCGG TCGAACCGGC GAGCCAGCTG CCGCTGCTGT GCCGCAAGCC GAACGGCTGG CCGAACAGCC GCGTCAGGGC GTCGATGCCC GACGACCTGC GGGAATGGGC CGATTCCCTC GACTCCGAGC CGCGCAAGGA GTTCCTGCGG GTGCTGCGGG ACGTGACCGC CGAGAGCGGC TACGGGCCGG CCGTCGAGGC CGCCGCCCGC ATCGTCGAGC TGGGCGGTGC GCCCGATAGG GCCTCGGTGA CCGTGCTCGC CGCCGGCATC TGCAACGGCC GCGGAGTCGT GGACTACGCC GACCCCGTCG ACATGTCCGA CTACGACGCG GCTTTCGCCG CGATCGGGGG CGGTTCCCAT GATCAGCAGA TGTGA
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Protein sequence | MISMSKVQDI RRMRREGESI AGISRATGVS EPTVRKYLKP QDLSPKMPVR AKGPSVMDEY SSIVDSWLEA DRGVWHKQRH TAQRVWERLV EEEGATMSYS TVRRYVKDWK DAHKGEGDGF LDQVGLPADM QVDFGQADFY VVGVRTRLHH LVCDFPFSNM GLAQVFPGEN AECACEGLMA VFSYIGGVPR RIIFDNATGV GRKMCGVIRT SKLFAAFAAH FGFEYVFCNA DAGNEKGGVE NKVGALRRRL FVPLPHFDNI RSYNARLLDK CTELADKEHC VKGEPESQLF MEDRFALLPL PDAPFKAVSW QRMKADKYGN VVLDGRHRYS SAPEFGGREL IVGRCAFDVE IYDSDGARVA THARAYGDRP TESVEPASQL PLLCRKPNGW PNSRVRASMP DDLREWADSL DSEPRKEFLR VLRDVTAESG YGPAVEAAAR IVELGGAPDR ASVTVLAAGI CNGRGVVDYA DPVDMSDYDA AFAAIGGGSH DQQM
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