Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_03230 |
Symbol | |
ID | 8394215 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 392732 |
End bp | 393361 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644985093 |
Product | transposase |
Protein accession | YP_003142739 |
Protein GI | 257063067 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.330594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGGCGCA TCATGCGCGA GGAGGGCCTC ACGCCCGTCT GGGCCGGGGG GAAGCGGGCC CCGTGGAGCT CGTACGCCGG CGAGCCCACG CCGGCGCCGC CCAACCTGGC CGCGCGCAAC TTCCGCTCGG CGCTGCCGAA CTTCCTGTGG GTCACCGACA TCACCGAGTT CCGCATCCCG GCCGGCAAGT GCTACCTGTC GGCCGTGCGC GACTGCTTCG ACTCGTCGAT CTTGGCCTGG CGCGTCGGGC CCCACCCCAC GGCCGACCTG GCCAACGCCT CGCTGGCGGA CGCCTGCGCG CTGCTCGCCC CCGGCGAGGC GCCCGTGGTC CACTCCGACC GCGGCGGCCA CTACCGCTGG CCGGGCTGGA TCGCGATCTG CGAGGAGTTC GGGCTGGTCA GGAGCATGTC GGCCAAGGGC TGCAGCCCCG ACAACGCGGC CATGGAGGGC TTCTTCGGCC TGCTCAAGCG CGAGTTCTTC CACGGGCGCG ACTGGCGCGG CTGGAGCCTG GTCGAGTTCA TGGACGCGCT CGACTGGTGG ATCGTGGGGT ACAATGAGGA GAGGCAGTGC TCGACGCTGG GCCACATGAC GCCCGCGGAG TTCCGCCGCA CGCTGGGAAG GGCCGCATAG
|
Protein sequence | MRRIMREEGL TPVWAGGKRA PWSSYAGEPT PAPPNLAARN FRSALPNFLW VTDITEFRIP AGKCYLSAVR DCFDSSILAW RVGPHPTADL ANASLADACA LLAPGEAPVV HSDRGGHYRW PGWIAICEEF GLVRSMSAKG CSPDNAAMEG FFGLLKREFF HGRDWRGWSL VEFMDALDWW IVGYNEERQC STLGHMTPAE FRRTLGRAA
|
| |