Gene Shel_03220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03220 
Symbol 
ID8394214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp391162 
End bp391923 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content48% 
IMG OID644985092 
Producthypothetical protein 
Protein accessionYP_003142738 
Protein GI257063066 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACAA AGACTATTGC CCTGAACAAT GGATTCAATC CAGACGATTT TCTTAGTTAC 
GTCAATGACA GGATTACTGC TGCGCTTCCA GGTAATCCGA CATTCAGGTA CCATTGCGGA
TTGCTGCGAA CCACCATCGC CGATGCTGAC GTCGAATTGC TTGTGTATGA ATATAAGGCC
GAATTGGATG CAAAGACAGC ACAAGAACGA GAGATAGAGA GACAACGCTC TATCATGATT
GATTGCGGCG CGATTCAATT CAATACAAAA GACCGACAGG TTGTTTTGCC CTCGTCCGAT
GGCATACAGA TCTTTCCCTA TGAGAGCGTC CTAGAATACG AGCTGCTTGA AGATGGCGCA
ACCGAAATGA GCGGTGGCGT TGGAAGGGCT GTAGTGGGAG GGCTGCTGTT CGGCGCGACC
GGCGCAATCG TAGGAAGCAC GACAAGAAGC ACGAAGAACA CTTGCTCACT CCTCGTGGTT
AAGCTAACCA TAGCGCAATT TGGAGCGGCG TATGCGACTT ATATATCCAA AACAGTAAGA
CGTGACAGCC CTTACTACTT GGCGCAATTC AAGCTCGCTC AAGATGCGCT TTCTCAGCTC
ACTATAATAT GCAACGAAAA CGAGGCAGCA GCTCAGCCAG TAGATGTTCC CGCAGGAAAT
ACACTGGCCG CTGAAGTGCT TGAGCTGAAA AAGCTTAAGG ATGCTGGAAT CTTGACGGAA
GAGGAATTTG AAGCAGGTAA GCGACGGATA CTTGGATTAT AA
 
Protein sequence
MDTKTIALNN GFNPDDFLSY VNDRITAALP GNPTFRYHCG LLRTTIADAD VELLVYEYKA 
ELDAKTAQER EIERQRSIMI DCGAIQFNTK DRQVVLPSSD GIQIFPYESV LEYELLEDGA
TEMSGGVGRA VVGGLLFGAT GAIVGSTTRS TKNTCSLLVV KLTIAQFGAA YATYISKTVR
RDSPYYLAQF KLAQDALSQL TIICNENEAA AQPVDVPAGN TLAAEVLELK KLKDAGILTE
EEFEAGKRRI LGL