Gene Shel_03190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_03190 
Symbol 
ID8394211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp389384 
End bp390151 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content58% 
IMG OID644985089 
Productdehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein 
Protein accessionYP_003142735 
Protein GI257063063 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAAGT TTGAAAACAA AACAGTTGTT GTGACCGGTG CTTCTTCGGG TATTGGAAAG 
GCAATTGCGG AAGCCTTCGG CGCAGAGGGC GCAAACGTTG CCGTGAACTA CCGCGCGAAC
AAAGATGGCG CCGATGCGGT AGTAGCCAAC ATCGAAGCCG CCGGCGGCAA GGCAATCGCT
GTTGAGGCCA ACATCATCGA TCCTGAATCC GTTCAGGCAA TGACCGACAA GATCGTCGAA
GCTTTCGGCA CCATCGACGT CTTGGTGAAT AGCGCAGGCG CCTTCGATAA CTTCACCCCC
ATTGAAGAGC TCTCCGTAGA AGAATGGGAC TGGATTATGG ATGTCGACGT CAAGGGCATC
TTCCTGTGCT GCAAGTACAT GGTCCCTGTC ATGCTGAAGA ACGAAAACGG CGGCAACGTC
ATCAACATCG CATCTGGAGC GGGCCTACGT GCTGGCGGCG GCAGCGTTGC CTACACCGCC
GCAAAGCATG CTGTGGTGGG ATTCACGGCT GCGCTCAGCG ATCTGTACTC CAACGAAGGC
AAGGGTATCC GTGCCAACGC CATCTGCCCT GGCCTGATCG AGACCCGCAT GGTTTCCGGC
CTACTCGGCG ACGAAGCAAC CGCCGAGAGC TTCCGCCACG GTCCCGCTGG CCGTTGGGGC
CAGCCCTGCG AAATCGCCAA TGCCGCTCTG TATCTGGCTA GCGACGAGTC GTCGTTCATT
CACGGCATCT CGCTGCCTGT TGACGGTGGC TGGCTGATTC GCCACTAG
 
Protein sequence
MGKFENKTVV VTGASSGIGK AIAEAFGAEG ANVAVNYRAN KDGADAVVAN IEAAGGKAIA 
VEANIIDPES VQAMTDKIVE AFGTIDVLVN SAGAFDNFTP IEELSVEEWD WIMDVDVKGI
FLCCKYMVPV MLKNENGGNV INIASGAGLR AGGGSVAYTA AKHAVVGFTA ALSDLYSNEG
KGIRANAICP GLIETRMVSG LLGDEATAES FRHGPAGRWG QPCEIANAAL YLASDESSFI
HGISLPVDGG WLIRH