| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03140 |
|---|
| Symbol | |
|---|
| ID | 8394206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 382645 |
|---|
| End bp | 384429 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644985084 |
|---|
| Product | succinate dehydrogenase/fumarate reductase flavoprotein subunit |
|---|
| Protein accession | YP_003142730 |
|---|
| Protein GI | 257063058 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGCTG GGTTGCCGGC TCGAGCGCTT GCCGACGACA CCTCGGTAGC GTCTAGCGAG
TCCGCTGACG GCTATCAGGT TCCCGATCGT CCGGCACCTA ACAGCCGCAT GGTTCCGTCG
CCCCAGAACA CGGGCATTAC CAAGCCGAAT GCCGAGCCTA TTCCACCCGA GCCTGCTCCG
GCCGCGTGGG ACGAAGAATA CGATGTTGTC ATCGTAGGCA GCGGTTGGGG TGGTCTGACG
GCAGCGAATA TGGCGGCTCA AGGCGGCTTG AAGACGGCAC TCATTGAGAA AGGCGACGTA
ACGGGCGGCG CCTCGAGACA TGCGGCTGAA AACGCTGTGA TTTCGGGCGG CTCGAAGGCA
CAGGAAGAGG CTGGTTACCA CTGGCCTGGC GACAAGTTTG ATCCTAAGGC GGCCACTACG
AAGTACGAGG AGTACTGCAG CTGGACCGTC GATTACAAGC TGCTCTACGA TTCGGTTATC
GCTGGCGCGG AGTGGATCGA CTGGATGATG GAACAGCCAG GTATTGAGTG GGTGGCAGCT
GGCCCCTGCA TGGAAGACAT TCGCGTGAAC AGCAAGGAGC AGAACACGCT GTTGGGCAAC
CATTGGACGG CTGAAGCGCT GACCGACAAC GCCATCGCAG ACGGCGTGGA AATCAAGCTG
CTCACTCAGT GCAAGGCCCT GATACAGGAC GGCGACCGCG TGGTGGGCAT CAAGGTTGCT
GACACGCTAG GCAACGAGAC GTACTTGAAA GGCGCCAAGG CTGTGCTGCT GACGGCGGGC
GGCTTCGGTA TGAATCTGGA CCTGCTGGAA AAATACACCC CGACAGCCTA CATGTACGCC
ACGCAAGGCG GCCCCATGCC CTCGCATACC GGCGAGTGCT TCCGCATGGG CCTAGGCGTC
GGAGCCGATG TGTCCGGTTT CAATTCGTTC TCCATGTGGG AGGGCGGCCT TGACGAGTAC
TGGGGCAATG GCGACGGCAA CTATTTCCAT CACTTCTGGA ACGGTGCGAA GCAGGTCATG
CAGAACCCCT GGCTGAAGAT TGACATTACC GGCAGGCGCA TGGAATTCTT CGCCAAGAGC
ACGGGTGACG GCATTCCCCA AGAGAACTAT CCGCACCTGG AGAATTGCGA AATCGGTGAC
CTGACCAGCG CAAACCACTG GAGTTCGTCA ATCGGTCATC GCGCATACAA CATCTTCGAT
TCGAAGTTCA AGGAGAGCTT GAAGGTGTTC GAGAACTCGG CCATGAACCC GAACCAGGAC
GCGCATCGTC AGCCGGTGAG CGAAGACAGG ACCGTGGTGA ACACGCTGGC TTCCAGTACC
GAATGGGAGA AGGAGTTCGA GGAGGCCGTG GCGCGCGGCG CTATTTCCAA GGCGGACACG
CTTGAAGAGC TGGCCGAGAT GCTGGGCCTA CGCCCCGAGC GCGTAACCGC GGCGGTCGAT
CACTGGAACA ACGACATTTG CGCGAAAGGC GAGGACACCG ATCTGCCAGC TCCCTACAAG
GAGGACTGGC TCATCCCCGT CGACACTCCG CCGTATTATG GTGCAGCTAT GGGCGGTCAA
ATCTCCAAGA CGATGGCCGG CCTGCGCGTC AATGAGAAAA TGCAGGTCAT CAACGCTGAA
GGCGACCCTA TTCCTGGTCT GTATGCAGGT TGGTACACAG CAGGTGGCAT CGGCGGCGTG
AACAATTATG GCGGAATCTT CGGTAACCCC ACCATTCATG CTGGCGTGGC GATTTCCGGC
GTTGGTGGGT ACATGGCCAT GAATGCCATT CTTGCAAACG AGTAA
|
|---|
| Protein sequence | MAAGLPARAL ADDTSVASSE SADGYQVPDR PAPNSRMVPS PQNTGITKPN AEPIPPEPAP
AAWDEEYDVV IVGSGWGGLT AANMAAQGGL KTALIEKGDV TGGASRHAAE NAVISGGSKA
QEEAGYHWPG DKFDPKAATT KYEEYCSWTV DYKLLYDSVI AGAEWIDWMM EQPGIEWVAA
GPCMEDIRVN SKEQNTLLGN HWTAEALTDN AIADGVEIKL LTQCKALIQD GDRVVGIKVA
DTLGNETYLK GAKAVLLTAG GFGMNLDLLE KYTPTAYMYA TQGGPMPSHT GECFRMGLGV
GADVSGFNSF SMWEGGLDEY WGNGDGNYFH HFWNGAKQVM QNPWLKIDIT GRRMEFFAKS
TGDGIPQENY PHLENCEIGD LTSANHWSSS IGHRAYNIFD SKFKESLKVF ENSAMNPNQD
AHRQPVSEDR TVVNTLASST EWEKEFEEAV ARGAISKADT LEELAEMLGL RPERVTAAVD
HWNNDICAKG EDTDLPAPYK EDWLIPVDTP PYYGAAMGGQ ISKTMAGLRV NEKMQVINAE
GDPIPGLYAG WYTAGGIGGV NNYGGIFGNP TIHAGVAISG VGGYMAMNAI LANE
|
|---|
| |