Gene Shel_02970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02970 
Symbol 
ID8394189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp365003 
End bp365605 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content60% 
IMG OID644985068 
Productprotein of unknown function (DUF1788) 
Protein accessionYP_003142714 
Protein GI257063042 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGG AATTCGAGCA CATCAACGAT GCACGCTCCT TCATCGTCGA GAAGCTTTCC 
GAGAATTCTC TCCTTGGCAG GGGCGGCTAC ATGATGAGAA ACGCGCTCTA CGTCCTGGAC
TACAAACCAG AACAGGAACC CTACGCGAGG GACCTCGTGC GGGCGATATG CGAATCCGAC
CTGCCTGCCC GTTCGGTGCG CCCACTCGTC GTGAACCTCT ACGACATCGT GCTCGCATTC
CTCGACGAAC AGGGCATGTG GGAGCCCCTT GTCGAGGCGG AACCCGATGC TTCGCGCGAG
GAGCTCATCA TGATGCTCCA GGACACCGTC AGCGTGCGCG ACGTCATAGC CCCGGCGGTC
AATGCGGCCA TCGAGGATAA CCCGGACGCC GACATCGTGT TCATTACTGG CGTCGGGGAG
ACCTATCCGT ACGTGAGAAC CCACACATTG CTTCAAGAGA TGAGCGCCAC GAAGCCCGTA
GTCCTCGTGT TCCCCGGGCG CTTCGAGCGC CGCAGCGACG GCTCCACCTC GCTGAACATA
CTCAACCTCG ACCAGGGTAC GACCGGAGGC TACTACCGTG CGACCCGAGT ATTCGACCTG
TAA
 
Protein sequence
MSAEFEHIND ARSFIVEKLS ENSLLGRGGY MMRNALYVLD YKPEQEPYAR DLVRAICESD 
LPARSVRPLV VNLYDIVLAF LDEQGMWEPL VEAEPDASRE ELIMMLQDTV SVRDVIAPAV
NAAIEDNPDA DIVFITGVGE TYPYVRTHTL LQEMSATKPV VLVFPGRFER RSDGSTSLNI
LNLDQGTTGG YYRATRVFDL