Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02970 |
Symbol | |
ID | 8394189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 365003 |
End bp | 365605 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644985068 |
Product | protein of unknown function (DUF1788) |
Protein accession | YP_003142714 |
Protein GI | 257063042 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCGG AATTCGAGCA CATCAACGAT GCACGCTCCT TCATCGTCGA GAAGCTTTCC GAGAATTCTC TCCTTGGCAG GGGCGGCTAC ATGATGAGAA ACGCGCTCTA CGTCCTGGAC TACAAACCAG AACAGGAACC CTACGCGAGG GACCTCGTGC GGGCGATATG CGAATCCGAC CTGCCTGCCC GTTCGGTGCG CCCACTCGTC GTGAACCTCT ACGACATCGT GCTCGCATTC CTCGACGAAC AGGGCATGTG GGAGCCCCTT GTCGAGGCGG AACCCGATGC TTCGCGCGAG GAGCTCATCA TGATGCTCCA GGACACCGTC AGCGTGCGCG ACGTCATAGC CCCGGCGGTC AATGCGGCCA TCGAGGATAA CCCGGACGCC GACATCGTGT TCATTACTGG CGTCGGGGAG ACCTATCCGT ACGTGAGAAC CCACACATTG CTTCAAGAGA TGAGCGCCAC GAAGCCCGTA GTCCTCGTGT TCCCCGGGCG CTTCGAGCGC CGCAGCGACG GCTCCACCTC GCTGAACATA CTCAACCTCG ACCAGGGTAC GACCGGAGGC TACTACCGTG CGACCCGAGT ATTCGACCTG TAA
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Protein sequence | MSAEFEHIND ARSFIVEKLS ENSLLGRGGY MMRNALYVLD YKPEQEPYAR DLVRAICESD LPARSVRPLV VNLYDIVLAF LDEQGMWEPL VEAEPDASRE ELIMMLQDTV SVRDVIAPAV NAAIEDNPDA DIVFITGVGE TYPYVRTHTL LQEMSATKPV VLVFPGRFER RSDGSTSLNI LNLDQGTTGG YYRATRVFDL
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