Gene Shel_02960 details

Gene Information

• Locus tag: Shel_02960
• ID: 8394188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Slackia heliotrinireducens DSM 20476
• Kingdom: Bacteria
• Replicon accession: NC_013165
• Strand: -
• Start bp: 361449
• End bp: 364991
• Gene Length: 3543 bp
• Protein Length: 1180 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 644985067
• Product: hypothetical protein
• Protein accession: YP_003142713
• Protein GI: 257063041

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 34
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCTGCTGA AGGACACCTT CCTCAAGGAC ATCTATCGCC CAATCGACCC TGTCGTCAAG 
GCGAACGAGC TCGGGCATCT GAAGAGCGAG CTGGAGGAGT TCGTCATCAC GAACGAGGCG 
AAGTCGCACC TGCAGCGATT CTTCGACGAG TACAACGACC CCGACTCCGC GGGCAACGGT 
GCGTGGATCT CGGGCTTCTT CGGGAGCGGC AAGTCCCACC TGCTCAAGAT CATGGCCGTC 
GTCATGGAGG ACAGGCAGGT GGACGGCAGG GGCGCCATGG ACTACATCCT CCCCAAGCTG 
TCGGACACGC CAGCGCTTGC AGCGGCGATG GAGCAGTCGA GGCTGAGGCA CCCATCGGAA 
AGCGTGCTGT TCAACATCGA CAGCTTCGCG CCCAACGCGG GCCGTTCCGA AGCAGGCGCG 
ATACTCTCTG CCTTCATCAA GGCGTTCAAC CACCACTGCG GGTACTTCGA CGGGGACCAG 
CAGCACATCG CCAAGCTCGA GTACGACCTC GACCGCGAAG GCCACTTCGA AGCGTTCAAG 
GCGAGGGTCG AGGAGCTCTG CGGCAAGCCC TGGGAGCAGG TTCGCTCCTC ATCGCTGCTC 
TACGGAAAGA AGATCACGTC GGCATTCGAC GAGGTATGCG GAAACCCAGA GGGCACGACC 
GCAAACGTCA TCAGCTACTA CCAGCAGACC TACAAGCCCG ATATCCGCAT GTTCGCACAA 
CGCGTCCAGG CCTACATCGC CGAGCACGGG AAAGGCTTCA GGCTCAACTT CTTCGTCGAC 
GAGGTCGGGC AGTTCATAGC CCAGAACACG AGCCTAATGG TGAACCTCCA GACCATCGCC 
GAGGAGCTCG ACAACTTCTG CCACGGGGAC TCCTGGGTCA TCGTCACCTC GCAGGAGAAC 
GTCGAGGATG TCGTCGGCCA GATGAAGCAG ATCAGCGCCA ACGACTTCTC GAAGATCAAG 
GACCGCTTCA AGACGAGGAT GGTGCTCACG TCGTCAGACG CGAAGGAGGT CATACGCGAC 
AGGCTCCTGG CAAAGCATCC AGGGGACGAG CCCTTCCTGG AAGAGATGTA CGAGGAGTAC 
CGTGCCGACT TCGACGTTCT GTTCGACTTC GCAGACGGCG CCAAGCGCTA CAAGCAGTAC 
CAGGGGGCAC AGGAGTTCTG CGACACCTAT CCCTTCGTGC CCTACCAGTT CGAGGTGTTC 
ATGACCGCGT TGCGCGGACT GTCGGACCAC AACTGCTTCA CGGGCAGGCA CAACTCCACC 
GGAGCCCGAT CGATGCTCGG CGTCTTCCAG ATGGTCGCGC AGCGCATATG CGACGCCGGC 
GCCAGCACCG AGCAGGGGAC GCTCGCACCC TTCGACCTGA TGTTCGAGGG CCTGCGCAAC 
GACCTCAAGA GCGAGGTGTA CGCCGCAATC TCCACGGCAG AGGACCAGCT CGACGACGAG 
GTGGCGGTGC GCCTGCTCAA GGCGCTCCTA CTCGTCAAGT ACTGCCAGGA CTTCAGGGCG 
ACGCCTGGGA ACCTGCGCGT GCTACTGTAC GGGTCCTTCG GCGAGAGCAC GAGCGAGCTG 
AACGGAAAGA TACGCGACGC GCTCGACACC CTTGAAGAGC AGGTCTACGT CAGGCGCAAC 
GGCAACATCT ACGAGTACCT GACCAACGAC GAGAAGGAAG TCGAGAAGGA GATCGCGAAC 
ACCATCGTCC CAGAAGTGGA GACGAGAAAG CAGATTGCGG AGCTCTTCAA GGACGTGTGC 
GGCGCGACCA GGGTCACGTA TCGGAACGGT TCATTCGAGC ATTCGTACCT GTACAACCTC 
AAGATCGACG GCGAGGCCCA GGGCCTGCAG AAGAACGACC TCACGGTCGA CATAGTCACC 
GACCGCGATG ACGGCGGGCT GTTCGGCGAC ATAGTGCCCA CGCCACCCAA GACGCTCACG 
ATCGAGCTCC GAAACTGCAA GGAGTTCCTG ATAGGCGTGA GGACGTTCAA GCAGACCGAG 
ACGTACACGG GCGTCCACAG CGGCGCCGGC GAAATTCGGG AAGCCATCCT ACACGACAAG 
CAGGTGGCGA ACGGAAAGCT CTACGCCAGG CTCAAGGACG AGCTAGCCCA GCTCCTGTCC 
GACGCCCGGT ACAATGCGGG AGGGGTCGAT ATCACCGGCC AGGTGACAGG CACCGCGGCA 
GACGCCGTCC AGTCCGCAAC ACAGGAGCTC GTCCGCAGGT CATACACGGG ACTGCAACAG 
ATCGGGCAGA AATTCAGCGA CAACGACGTA TACACGCAGT GCTTCTCCTC CGAGGCGGCC 
TTCGGCCTCC CGGAGTACTG CGAGACGGTC CTCTCTCGAA TCAGGCTCAC CAAGGGGGCG 
GTCGCGTCGA CCGTCGCAGG CGACGGCTCA GGCAGCCTGA CGGGTTACTT CATCAAGAAC 
GAGTACGGCT GGCCGGAAAT CGCGGTCCGC TCCGCGATAG CGCGGCTCTT CGCCGCGAAC 
AAGATCGAGG TCCGGAAGTC GGGGTCCCCG CTCGAGAAGT CGGCGCTGGC TGACGCCCTC 
AAAAGGAAGC GGGACCTCGA TAAGCTGGTG GTCTCAACCA TCGACGAGGT ATCGCCCGAG 
GACATCGCCG CGCTCAGCCG CGCATTCAAG CTGTTCGCCG GCACGCAGCC CAAGGGCGTG 
GACCAGAAGA CGATCGCCTC GGAGCTAGCC GAGGTAGCCG CATCCCTCGC CAAAGGCTTC 
GGGTCAACCG CCTCTGCAGC GCACGTTTAC CCATTCGGCG ACGCCTATGA AGCGGCGCTT 
GCGAAGGTCG AGGAGTGCGC TAAGAACGCA TCGGATTGGA GATGGGCTCT CGGCGAGTTC 
CCAGCAAAAG CACAGGAGTA CGCCGACGCG ACGAGCGATC TGAAAAAGAT GGCCTCGTTC 
GCCGGGGGGT CGCCGATGAG CAAGCGGTGG CTCGAGCTGA GGTCCTTCAT GGCGTCGGAG 
GCGGCACACC TCACCGAGCT TGGTATCGTC GACGAGGGAG TCGCAGCGAT CAGCGCGATC 
GTGGAGGATC CGGAATGCTT CAAGAACTCC GGGATACCCC AGGCAGCCAA GCAGATGGAG 
GCCCTGAAGA AAGAGGCCGA ATCCGCGCGC GCGAGCCTGA GGGATGCTGA GAGAAGGAAG 
CTCGCCGAGT ACAGGGCCTC ATACGAGGGT ACATACGATA TCGCCGCGCT CCCGCAGGAG 
GCGGCCGAGG AGTTCGACGG CCTGTTCTCA GAGGCAGAGG AGCAGCTGGG CCTTATCCGC 
ATCCCGTACA AGATCAAATC GTTCACCGAG GACTTCAAGA AGGACAAGGC AGCTCGTCTG 
CTCGAGCTCG TGACCCCAAA ACCGGCACCT CCCGTCACGC CGCCAATCGA CGTGCCCACG 
CCTCCCGATG ATGACGACGT GCCGCCGGTG CACGTTCCGA AGACCATCCC GGTCACGAGC 
CTGTCGGCAA AGGGGTACAG CAAACCCGCC ATCACGACCG AGGACGATGT TGACAAATAC 
CTCGCTGCCC TCAGGGCCTC GATCGTAGCA GTCGTTTCGG GCGGAGACAT CGTTTCCATC 
TAG 

 

Protein sequence

MLLKDTFLKD IYRPIDPVVK ANELGHLKSE LEEFVITNEA KSHLQRFFDE YNDPDSAGNG 
AWISGFFGSG KSHLLKIMAV VMEDRQVDGR GAMDYILPKL SDTPALAAAM EQSRLRHPSE 
SVLFNIDSFA PNAGRSEAGA ILSAFIKAFN HHCGYFDGDQ QHIAKLEYDL DREGHFEAFK 
ARVEELCGKP WEQVRSSSLL YGKKITSAFD EVCGNPEGTT ANVISYYQQT YKPDIRMFAQ 
RVQAYIAEHG KGFRLNFFVD EVGQFIAQNT SLMVNLQTIA EELDNFCHGD SWVIVTSQEN 
VEDVVGQMKQ ISANDFSKIK DRFKTRMVLT SSDAKEVIRD RLLAKHPGDE PFLEEMYEEY 
RADFDVLFDF ADGAKRYKQY QGAQEFCDTY PFVPYQFEVF MTALRGLSDH NCFTGRHNST 
GARSMLGVFQ MVAQRICDAG ASTEQGTLAP FDLMFEGLRN DLKSEVYAAI STAEDQLDDE 
VAVRLLKALL LVKYCQDFRA TPGNLRVLLY GSFGESTSEL NGKIRDALDT LEEQVYVRRN 
GNIYEYLTND EKEVEKEIAN TIVPEVETRK QIAELFKDVC GATRVTYRNG SFEHSYLYNL 
KIDGEAQGLQ KNDLTVDIVT DRDDGGLFGD IVPTPPKTLT IELRNCKEFL IGVRTFKQTE 
TYTGVHSGAG EIREAILHDK QVANGKLYAR LKDELAQLLS DARYNAGGVD ITGQVTGTAA 
DAVQSATQEL VRRSYTGLQQ IGQKFSDNDV YTQCFSSEAA FGLPEYCETV LSRIRLTKGA 
VASTVAGDGS GSLTGYFIKN EYGWPEIAVR SAIARLFAAN KIEVRKSGSP LEKSALADAL 
KRKRDLDKLV VSTIDEVSPE DIAALSRAFK LFAGTQPKGV DQKTIASELA EVAASLAKGF 
GSTASAAHVY PFGDAYEAAL AKVEECAKNA SDWRWALGEF PAKAQEYADA TSDLKKMASF 
AGGSPMSKRW LELRSFMASE AAHLTELGIV DEGVAAISAI VEDPECFKNS GIPQAAKQME 
ALKKEAESAR ASLRDAERRK LAEYRASYEG TYDIAALPQE AAEEFDGLFS EAEEQLGLIR 
IPYKIKSFTE DFKKDKAARL LELVTPKPAP PVTPPIDVPT PPDDDDVPPV HVPKTIPVTS 
LSAKGYSKPA ITTEDDVDKY LAALRASIVA VVSGGDIVSI