Gene Shel_02890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02890 
Symbol 
ID8394181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp348173 
End bp348733 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content49% 
IMG OID644985060 
Producthypothetical protein 
Protein accessionYP_003142706 
Protein GI257063034 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0626872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCACG ATTCCCAAGA CTATAGGGAG GCTCTGAAAA ACCAGATACG CGACGAATAT 
GGACGGTTGA CCTACACATA CACCTGCCAC AACAAAGACG CCGCGTTTTA CGCCATTGGC
GAAAAAGCGA TCAGCTGGCT TCAGCTTGTG TTGTCCGTAG TGTCAACCTG TTCGGTAATG
AGTCTTCTCG TTTCTGACGG GAAGGTACAA CTTTGGATTG CCGTTGTTGC CTCAGCGGTT
CTTGCCCTCA TCAGCGCGTT TGACAAGGAA AAGAATTTCA CGGCTAAAGC AAACTCCCAT
ACAGAGGCAG CAAACCAGAT TTGGTTGATC CGCGAGAAGT ACATTTCATT GATTACGGAT
TTCGACATTC TTACGGACCA AGACGTACGC CAGGCCAGAG ATGCATTATT GCTGGAAACC
AGCGGTGTTT ATAGCAGCAC TCCGAAAACA ACGCCGCGAG CGTACAGAGC GACACGAGTC
GCATTGAAAA ACGATGAGGA GCAATTCTTC ACTGATGACG AATTGGACAA GCTGCTACCG
AAAGCTCTGA GACTCGGTTA G
 
Protein sequence
MAHDSQDYRE ALKNQIRDEY GRLTYTYTCH NKDAAFYAIG EKAISWLQLV LSVVSTCSVM 
SLLVSDGKVQ LWIAVVASAV LALISAFDKE KNFTAKANSH TEAANQIWLI REKYISLITD
FDILTDQDVR QARDALLLET SGVYSSTPKT TPRAYRATRV ALKNDEEQFF TDDELDKLLP
KALRLG