Gene Shel_02710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02710 
Symbol 
ID8394163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp327572 
End bp328378 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content59% 
IMG OID644985042 
Productprotein of unknown function (DUF1814) 
Protein accessionYP_003142688 
Protein GI257063016 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCC GCCGCATCAC GTCTTCCGAA CGGGATTTCG TCCGTTACCG CACAACCATT 
GCGAATGCCA TAGTGGGACA GCTGCTGCCG AGCGGCGTCG TCAAAGGAGG CACCGCCCTC
AAGCTTCGCT TCGGGAATTC GGCCACCCGT TTCACAACCG ACCTCGATAC GGCGCGAAGC
GAGAGCCTCG ACAGATTCAT CGACGAGCTC TCCGAGCGAC TTGACGAAGG CTGGGAGGGC
TTCACTGGAC GAATCGTTAC GCGCACGCCC GCATCGCCTG CGGATGTTCC CCACCGATAT
GTTATGCAGC CTTTCGACGT GAAGCTCTCC TACGCCGGAC GTGCTTGGTG CACCGTGCCG
TTGGAGGTCG GCCACAACGA GATCGGAGAC GCATGTGAAC CAGAGCTGTC AATGTCTCCC
GACGTGGCAG AAATGTTCAC GCTTCTCGGC TTCCCCGAGC CCGGGCCGAT ACCCCTTATG
CCTTTGCACC ATCAGATTGC CCAGAAACTT CATGGTCTGA GCGAACCCAA TAGCAAACGG
GCGCACGACC TTGTCGACCT GCAGCTCATC TCCAAGCACG GGAGCGTTGA CCTGCGAAAA
ACGAGAGAAA CGTGCGAAAG ACTATTCGCT TACAGAAAAG CGCAACCATG GCCCTGCGAG
ATACGTTGCG GGACCGGATG GGGCGAACTC TATGCTTCGG CAGCCGCAGA CTTACCCGTG
CTGCAAGACC TGAACGACGC AATCGAGTGG GCCAACGAAC TGATCCACGC AATCGCAGGA
CAACGCCCCG GAGATGCGAG CCAATAG
 
Protein sequence
MAIRRITSSE RDFVRYRTTI ANAIVGQLLP SGVVKGGTAL KLRFGNSATR FTTDLDTARS 
ESLDRFIDEL SERLDEGWEG FTGRIVTRTP ASPADVPHRY VMQPFDVKLS YAGRAWCTVP
LEVGHNEIGD ACEPELSMSP DVAEMFTLLG FPEPGPIPLM PLHHQIAQKL HGLSEPNSKR
AHDLVDLQLI SKHGSVDLRK TRETCERLFA YRKAQPWPCE IRCGTGWGEL YASAAADLPV
LQDLNDAIEW ANELIHAIAG QRPGDASQ