Gene Shel_02510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02510 
Symbol 
ID8394143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp303625 
End bp304554 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content59% 
IMG OID644985022 
Producttranscriptional regulator 
Protein accessionYP_003142668 
Protein GI257062996 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0329478 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.901982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG AGCAAAAACG TGGGCCGGCG ATGCTGTTTT CAATGCAGAT GTCCACCGTT 
ATCTACGAGC ATTTCAAGCG GTCATCGAGG TTTCTCCGCG TGCATTTCGG CCTTCGCTAC
AATGCGTTCA CCATACTGTT GTGCCTTTTG GAAGCCCAGC GTCCTGCCGC GGTCGCCGAG
CTTGCGGACT ATTTGATGCT GAGCAAGAAC ACCGTGCTGT CGTTGCTTCT TGCCTTGGAA
GACGATGGGC TTGTGGCGAA GACCGGACGT CCGAATGACA ATCGTTTCAT GGAATGCACG
CTCACGGACG AAGGTGTCGG CTTGGTGCGA AAGGCGTCGC GCGACGTGTC GGACATGCTG
GCGAACACGT TTCTGGCATC GCTTCCCATG GACGAGTTCG CTCGTTTCAG CGACATCGAT
TCCGCCACGC GTGTGCTGCG CGGTCACGAC GTACCGGGCT TCGGCGCCAC GGCTCCTGGC
ACGGCGTCGA TCGACAGCCG TGAATACCTG TTCCCATCGG GCCATTTTGT GGAATGGCAT
GTGCTGGTGG ATCGCTGGAA GGCGTGCTTG CGGCGCCATT CGCCTCTATC GTTCGACGAA
TTCCGCATTC TCGACCTGGT GTCCTCGCGG GAGGGCATGA CACTGGGCGA GGTGGCCGAA
GGGCTGCAGC TGCAAAAAAG CGGGCTGAGC ATATATAAAA GCCGTCTTGA GGAATCGGGT
TTGCTGCAGT GCCGCCCCGA CCCGTTCGAC GGCCGCAGGA CCGTCGTGCG ATGCACGGCA
GAGAGCGCGC GAATGGTCGC CGAGCTGCGT ACTCGGTTGG ACGAGGTGAC GCGCGCGGGA
CATGTAGGAC TGTCGGAAAC CGACGCCATT GTGCTTGACG CCTGGTATAT GCGCATGTAC
AGCAATATGC GCACAACGGC GTCAGAATAG
 
Protein sequence
MANEQKRGPA MLFSMQMSTV IYEHFKRSSR FLRVHFGLRY NAFTILLCLL EAQRPAAVAE 
LADYLMLSKN TVLSLLLALE DDGLVAKTGR PNDNRFMECT LTDEGVGLVR KASRDVSDML
ANTFLASLPM DEFARFSDID SATRVLRGHD VPGFGATAPG TASIDSREYL FPSGHFVEWH
VLVDRWKACL RRHSPLSFDE FRILDLVSSR EGMTLGEVAE GLQLQKSGLS IYKSRLEESG
LLQCRPDPFD GRRTVVRCTA ESARMVAELR TRLDEVTRAG HVGLSETDAI VLDAWYMRMY
SNMRTTASE