Gene Shel_02360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02360 
Symbol 
ID8394128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp286604 
End bp287857 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content61% 
IMG OID644985007 
Productarginine deiminase 
Protein accessionYP_003142653 
Protein GI257062981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2235] Arginine deiminase 
TIGRFAM ID[TIGR01078] arginine deiminase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0263165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTA TTCACGTGAC AAGTGAAATC GGCAACCTGA GGAAGGTTTG CGTGCATCGC 
CCCGGCGATG AGCTGCTCAA CCTGCCTCCG GACTCCCTTG ACCGTCTTCT GTTCAACGAC
GTCCCGTTCC TGGACGTCGC CCAGCAGGAG CATGATGCCT TCGTGGACAT GCTTCGTTCG
CAGGGTGTCG AAGTCCTGTA TCTCGAGAAC CTGGTGGCCG AAACCTTCGA CGCATCGCCG
AAGTTCCGCG CCCGGTTCCT TGATCAGTTC ATCGCCGAAG CCTCCATCAA AGGCGATCAG
ATGGCCAAAG AGGTCCGTGC GTACCTGGAT TCGTTCGAGG ACAACCTGGC TCTGGTCAAA
AAGACCATGG CGGGCATTAC CCGCAGCGAG CTGGACCTGC CCCGCACGTA CCCCTACACA
ACGCTGCAGG ACATGGTAAA CGAGCACTTC AACCGCGATT CCGTACTGGT CGTCGACCCC
ATGCCCAACC TGTGTTTCAT CCGCGACCCC TTCGCGTGCA TCGGCGAAAG CGTCACCGTC
AACCGCATGC ACTCGCCGAT CCGCAACCGC GAATCGCTGT ACATGGAGCA CCTTTTCAGC
TGTCATCCCG ATTTCGTGAA CACGCCGCAG CTGCTTAGCC GCACCGATCC GTACTCCATC
GAGGGCGGCG ACGTGCTGAA CCTGACCCGC AAGTCGCTGG CCGTGGGCGT TTCGCAGCGC
ACCGAACCTG CCGCCATCGA CCACATCGCC CGCAACGTGT TCTGGAATAC AGAAGGTTCC
GAAATCGAGC GGATCTTCGC TTTCGAAATT CCGCCCTACT CGGAATTCAC CCACCTGGAC
ACGGTGTTCA CCCAGATCGA CGTGGACAAA TACACGGTGC ATCCGGCCAT CCTGGGGTCT
ATGCGCGTGT ACGAGATGTC GAAGGGTTCC CGCCCGGGCG AGGTGCGCAT CAAGCGCCAC
GTCGACGCTC TGGAGCGCAT CCTGGAGTAC GCCACCGGCG TGGACGGCAT CAAGCTCATC
CCCTGCGGTG GGCAGGACCG GCTGGCGTCG GTCCGCGAGC AGTGGAACGA CGGCACCAAC
ACGCTGTGCA TCAAGCCCGG CACCATCTGC GTGTACCAGC GCAACAAGGT GACCAACGAC
CTGCTGTACA AGGAGGGGCT GGAGCTTCTG GTGGTTCCCT CCGCAGAGCT GTCCCGCGGA
CGCGGCGGCC CCCGATGCAT GAGCGCGGCA CTGCAGCGCG CAGACGTTTT GTAA
 
Protein sequence
MTGIHVTSEI GNLRKVCVHR PGDELLNLPP DSLDRLLFND VPFLDVAQQE HDAFVDMLRS 
QGVEVLYLEN LVAETFDASP KFRARFLDQF IAEASIKGDQ MAKEVRAYLD SFEDNLALVK
KTMAGITRSE LDLPRTYPYT TLQDMVNEHF NRDSVLVVDP MPNLCFIRDP FACIGESVTV
NRMHSPIRNR ESLYMEHLFS CHPDFVNTPQ LLSRTDPYSI EGGDVLNLTR KSLAVGVSQR
TEPAAIDHIA RNVFWNTEGS EIERIFAFEI PPYSEFTHLD TVFTQIDVDK YTVHPAILGS
MRVYEMSKGS RPGEVRIKRH VDALERILEY ATGVDGIKLI PCGGQDRLAS VREQWNDGTN
TLCIKPGTIC VYQRNKVTND LLYKEGLELL VVPSAELSRG RGGPRCMSAA LQRADVL