Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_02320 |
Symbol | |
ID | 8394124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 281001 |
End bp | 281654 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985003 |
Product | uncharacterized membrane-associated protein |
Protein accession | YP_003142649 |
Protein GI | 257062977 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.631494 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACATCG TCAATTTCTT CGTCTCGCTG CTGAAGGATC CTCGCTCGGC CATCGCGGGC TGGATCGTCG CCTTGGGCCC TGTTTGGGTG TACACCCCGC TGTTCCTCAT CGTGTTCGTC GAGACCGGCC TGGTCTTCTT CCCGTTTTTG CCGGGCGACT CGCTGCTGTT CGCGGCGGGC GTGTTCTCCG CTCCCGGCGG CGGCCTGCAT CTGGGCGCGA CCTTGGCCGT CTTCTACATC GCGGCCATCC TGGGCAACAC CTCCAACTAC TGGATCGCCC GGTTCTTCGG TTCGCGCATC ATCGACTCCG GCAAGGTGAA ATCCCTCACC CCCGAGCGCA TGGCCAAGCT CGACGGCTTC TTCGAGAAAT ACGGCGGACT GACCATCGTC ATCACCCGTT TCATGCCGTT CTTCCGCACC TTCGCGCCGT TCATCGCGGG CACGGGCCAT ATGAATTTCG CCAAGTTCAC GCTCTTCAAC GCCATCGGCG GCATCTCCTG GGTGAGCCTG TTCGTCCTGG TGGGATACTT CTTCGGCGGC ATTCCCTTCG TGCAGGAGCA CTTCGAGGTC ATCGTTTTAG GCATCGTGGC CGTGTCGGTG GCTCCCGCCT TCATCGGCGC CGTCAAGGGG GCCTTGGCCG CCCGCAAGAA GTAG
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Protein sequence | MDIVNFFVSL LKDPRSAIAG WIVALGPVWV YTPLFLIVFV ETGLVFFPFL PGDSLLFAAG VFSAPGGGLH LGATLAVFYI AAILGNTSNY WIARFFGSRI IDSGKVKSLT PERMAKLDGF FEKYGGLTIV ITRFMPFFRT FAPFIAGTGH MNFAKFTLFN AIGGISWVSL FVLVGYFFGG IPFVQEHFEV IVLGIVAVSV APAFIGAVKG ALAARKK
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