Gene Shel_02190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02190 
Symbol 
ID8394111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp269281 
End bp270303 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content64% 
IMG OID644984991 
Producthistidine kinase 
Protein accessionYP_003142638 
Protein GI257062966 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGCC TACAAACATA TCTGGCCATC CTCGCGACGC TCTTTACGGC CACGGGCACC 
ATCCTGCTGA CCATGGTCAG CAGCGTGATT GACCTTTCCG CCTTTGAAAC GGCCTGGTTC
ATCCTGCTCA TCTGCACCGT GACCTTCGCC ATTAGCCTGG TTATCGGCCA CTACCTGGTG
GAACCGCTGA AAAACCTGCA CCTGAAGGCG CAGACCCTGC TCAGCGGCGT GACCGACGTG
TCCTTCCAGC CCGAAGGAAC CATTGCCGAG GCCGACATGC TGGCCCGCGA CTTCCACGAC
CTGAGCGAAA AGACCTCCCA GCAGATGGCC GATCTGAGTG TGCAGCAGAA ACGCCAGACC
CAGTTCATCA GCGACGTTGC CCACGAGCTG CGCACGCCGC TTACGGCCAT CCGCGGCAAC
GCCGAAACGC TGGCCGACCC CGATATGCCG CAGGACCTGC GGGAACGCTT CACCCATACC
ATCGTCAGCG AGGCCGAGCG CCTGACCCGC CTGACCAATG ACCTGCTCAC GCTGCAGCAC
ATCGAGGACG GAAGCGAGCA GCAGGCGCTG CAGCGCGTCA ACCTGCGCAC CATCGCCACC
GACGTAGCCG ACGTGCTGGA AACCCTGGTG GAGGACCGTA ACGGCACCAT CGAGGTGGTG
GGCGAAGCCC CCGACGTGCT GGGCAACCCC GACCGCCTGC AGCAGGCCAT CTACAACCTG
GTGGCCAACG CCTGCCGGTT CATCGGCGAC GGCGGACACA TCGTCATCCG GCTGGAAGGC
GTCGACGACA AGACCATCGT GAGCGTCATC GACGACGGCC CGGGATTCGG CGACACAGAC
CCGAACATGC TGTTCAGCCG CTTCTACCGC GGCGACAACT CCCGCGCCCG CAACACGGGC
GGCACGGGTC TGGGGCTGGC CATCGTCAAG AGCGTCGTGG AGGCCCACGA CGGCACCGTG
CAGGCGTTCA ACGTGGCCAG CGGCGGAGCC TGCTTCATGA TCGCACTGCC TTCGGTCCAC
TAG
 
Protein sequence
MHRLQTYLAI LATLFTATGT ILLTMVSSVI DLSAFETAWF ILLICTVTFA ISLVIGHYLV 
EPLKNLHLKA QTLLSGVTDV SFQPEGTIAE ADMLARDFHD LSEKTSQQMA DLSVQQKRQT
QFISDVAHEL RTPLTAIRGN AETLADPDMP QDLRERFTHT IVSEAERLTR LTNDLLTLQH
IEDGSEQQAL QRVNLRTIAT DVADVLETLV EDRNGTIEVV GEAPDVLGNP DRLQQAIYNL
VANACRFIGD GGHIVIRLEG VDDKTIVSVI DDGPGFGDTD PNMLFSRFYR GDNSRARNTG
GTGLGLAIVK SVVEAHDGTV QAFNVASGGA CFMIALPSVH