| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_02070 |
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| Symbol | |
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| ID | 8394099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 255605 |
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| End bp | 257095 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644984979 |
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| Product | putative efflux protein, MATE family |
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| Protein accession | YP_003142626 |
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| Protein GI | 257062954 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGA TTGAAGAACG TAACCAGATG GAACCCGCCG CGCCGAAAGG TGCGCCCGCG
GGTAGAGCCG ACAACGACAA GGTGGAACGC CTGGGCACGG GCAATATCCC CAAACTGGTG
AGGGAATTCG CCATTCCTGC CATCGTCGGC ATGATCGTGA ACGGCGCCTA CCAGATCATC
GACACCATCT TCCTCGGGCA CGGCGCGGGC GACCTGGGCC TTTCCGCCAT CACCGTGGCG
GGTCCGGTCA TGATGCTGTT CCTGGCTGCG GCTATGCTGT TCGGCTCCGG CGGCAACGCC
CTGTGCGCGC TGCGCCTGGG CGAAGGCAAG CATGGCGAGG CCGAGCACAT CCTGGGCAAC
ACCTTCAGCC TGTCCATCCT GGTCAGCATC ATTTTCGCCA TTCTGGCGCA CATTCCGTTC
TTCATCGAGC CGCTGCTCAC GCTGTCCAGC GCCACCGACA CGGTGCGTCC TTACGCCCGC
ACGTTCATCC AGATCATCAG CCTGGGCGCC GTGTTCCAGG TGGTCGGCTT CGGCATCAAC
AACTTCATCC GTACCTGCGG CGCGCCCAAC CGCGCGCTTG GCACGCTGAT TATCGGCGCG
GTTGCCTGCA CCGTCTTCAA CGCGATCTTC GTTATGGGCC TGGGCTGGGG CGTCGCCGGC
AGCGCGTGGG CCACGGTGTG CGGCCAAGCC ATCAGCTGCA TCTCCGTCAT CTGGTACTTT
ACGAAGACCC CGGGCGTGCC CCTGCGCCTT CGCAAGAAGT ATTTCCCCAT CGTGCCGAGC
CTAGCCAAAG AGATCGTCAC GCTGGGCCTG GCCTCCTTCG CGGTGCAGGT CGGCGGCGTC
GTTGTGACTG TGGTGTTCAA CTACGTCCTG GTCAAGTACG GTGCGATGGA CCCCATCGGA
GCGGACGGCG CGCTGGCATC CATCGGTGCC GTGCAGCGTA TCGCTGGCTT CGTGATCATG
CCTTTGGTGG GCATTTCGGT GGCCATCCAG CCCATCTTGG GATTCAACTA CGGCGCAAGG
CTGTTCCGTC GCGTGCGCAC CACCTTCGCT GTAGGTGAGA AATGGGCCGC CATCATGGGA
ATCGCCATGT GGGTCGTGCT GATGGCCTTC GCGCCGCAGA TCATGGCCAT TTTCGGCGTG
AGCGAGGAGC TGACCGACTT CGCGGCCTTC GCGTTGCGCG TCAATCTGAT TACGCTGCCG
GTCATCGGCT GCCAGATTGT TGGTGCCAAC TACTTCCAGG CAACGGGCCA GCCTACGAAG
AGCATCATCC TGTCGCTCAC GCGCCAGATC ATCTTCCTGC TGCCCGCGAT GCTCATCCTG
CCCGAGGTGC TGCCGAGCAT CGTGCCGTTC ATGGACGGTC TGGATGCTTG CTACGCCGCC
GGACCTTTTG CGGATATCCT GGCATGCTTC ACGACGGCGA TTTTCGTTGC CATCGAACTG
AAGAAGCTCA ACGCCCGCAT CGCCAAACAG GATGCCGAGG CTGCTGCCTA A
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| Protein sequence | MAEIEERNQM EPAAPKGAPA GRADNDKVER LGTGNIPKLV REFAIPAIVG MIVNGAYQII
DTIFLGHGAG DLGLSAITVA GPVMMLFLAA AMLFGSGGNA LCALRLGEGK HGEAEHILGN
TFSLSILVSI IFAILAHIPF FIEPLLTLSS ATDTVRPYAR TFIQIISLGA VFQVVGFGIN
NFIRTCGAPN RALGTLIIGA VACTVFNAIF VMGLGWGVAG SAWATVCGQA ISCISVIWYF
TKTPGVPLRL RKKYFPIVPS LAKEIVTLGL ASFAVQVGGV VVTVVFNYVL VKYGAMDPIG
ADGALASIGA VQRIAGFVIM PLVGISVAIQ PILGFNYGAR LFRRVRTTFA VGEKWAAIMG
IAMWVVLMAF APQIMAIFGV SEELTDFAAF ALRVNLITLP VIGCQIVGAN YFQATGQPTK
SIILSLTRQI IFLLPAMLIL PEVLPSIVPF MDGLDACYAA GPFADILACF TTAIFVAIEL
KKLNARIAKQ DAEAAA
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