| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_02060 |
|---|
| Symbol | |
|---|
| ID | 8394098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 254805 |
|---|
| End bp | 255374 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644984978 |
|---|
| Product | birA, biotin-(acetyl-CoA-carboxylase) ligase |
|---|
| Protein accession | YP_003142625 |
|---|
| Protein GI | 257062953 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0340] Biotin-(acetyl-CoA carboxylase) ligase |
|---|
| TIGRFAM ID | [TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.526889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTCG ACATCACCTA TAAGCAAACC ACCGGCTCCA CCAACGACGA CGTGTGGGAC
TTGGCCCAAG CGGGCGCGCC CCAGGGCACC TGCGTGGCGG CCTTCGAGCA AACGGCTGGC
CGCGGCAAAT GGGACCGCGT ATGGGTGGGG CCTCGCGGCG GGCTGTACTT CTCATTCATC
CTGCGGCCGA CTACGCCCGT GTCGGAATGG CCTCAGATGA GCCCCGCAAT TGCCGAGGCT
ATCGCGAAGG TGGTGCGCGA GCAGACCGGA GCCGGCGCCG ACGAGGTGTG GGTGAAGCTG
CCCAACGATG TGCTGTGCCA CCAGGGCAAA CTCTGCGGCA TCCTGCTTGA AGCCAAAGAT
GGCGTCGTTG TGGTGGGCTG CGGCCTGAAC GTGTTCCCTC CGGAAACGCC CGCGCAGACC
GACGGCCGCA ACGTTCCCGC ATACGTGTCT GACCTGGGGA ATTTCGTCGG AGTGACCGGG
GTGGACCCAG CCAAAGCCGA TGCGCACGAC GCCTATCTGA CGGCATTGGT GCCGAAACTC
GCCGCATCCA TCGAAGAGGC CGTTCTCTAA
|
|---|
| Protein sequence | MAFDITYKQT TGSTNDDVWD LAQAGAPQGT CVAAFEQTAG RGKWDRVWVG PRGGLYFSFI
LRPTTPVSEW PQMSPAIAEA IAKVVREQTG AGADEVWVKL PNDVLCHQGK LCGILLEAKD
GVVVVGCGLN VFPPETPAQT DGRNVPAYVS DLGNFVGVTG VDPAKADAHD AYLTALVPKL
AASIEEAVL
|
|---|
| |