Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01990 |
Symbol | |
ID | 8394091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 247493 |
End bp | 248440 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644984971 |
Product | DNA-binding protein, excisionase family |
Protein accession | YP_003142618 |
Protein GI | 257062946 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000725149 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCCACG AACAGCAACT GAACGCCACC GACGTCGCCG GGATCCTTCA CGTGGGAAAG AACAAAGTGT ACGAGATGGC AGCCAGCGGC GAGCTGGGGT CGTACCGAAT CGGACGCAAG CTGCGCTTCA CCATGCACGA TGTGGAGCAG TACCTGACCG CGCAGCACAC CGGCGGCGCG ACCGCCGCCC AGGCAGAATC CGAAGACGAC CACGGCCCCG CGTACCTTTC CGCCATTACC CACGACAACG CAAGCGTCGT GCTTGCCGGC ACCGATGCCG TGTGCGACGC GCTTTCAAGC TCGCTGGCCG AAGCGGGCCT ACCCGCGGCC CGGCGCCACA TCAACGGATT TGCCGCCCTG GTGGGCATGT ACCTCGGCCA GGTCGATGTG GCCGTCGTGG ACCTGTACGA CGCGAAAACC AACAGCTACA ACATCCCGTA CGCCCAGCGT GTCGCGCCTG GCACGCCTGT GGTGCTGATC AGCCTGGCCG ACCGGCAGCG CGGGTTCATA GTGGCCGAAG GCAACCCGAA ACGCCTCACC ACCTGGGGCG GCCTGCTTAA GGACGGCGTG CGTCTGGCCC AACGTGAACT GGGCACCGGC GGACGTGTGC TGCTGGACGA AAAGCTCATG GCAATCGAGG CCAGGCCCTC TAACATCGCG GGCTACAACG GCCCGGCCAC CAACGGTCTC GAAGCGGCGA AACGCGTGGC CAGTGGTGAA TCGGACGTCA CCATCGGCAC CGCCCGCGAG GCAGCGATGG TCGAAGGCCT GCAGTTCGTC CCCATGCAAA CCGAACATCT GGACATCGTG GTGCGCAAGT CCCCCGAAAA CCGCGGGCTG TTGCGCCAGG TGAAACGGAT CGCCGCGTCG GAGAGCTTCC GCCATGCGCT GGAATCGATG CCCGGGCTGA GCTGCGGTCG TCTGGGCGCT GTGCGCTACG AGAGCTAG
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Protein sequence | MLHEQQLNAT DVAGILHVGK NKVYEMAASG ELGSYRIGRK LRFTMHDVEQ YLTAQHTGGA TAAQAESEDD HGPAYLSAIT HDNASVVLAG TDAVCDALSS SLAEAGLPAA RRHINGFAAL VGMYLGQVDV AVVDLYDAKT NSYNIPYAQR VAPGTPVVLI SLADRQRGFI VAEGNPKRLT TWGGLLKDGV RLAQRELGTG GRVLLDEKLM AIEARPSNIA GYNGPATNGL EAAKRVASGE SDVTIGTARE AAMVEGLQFV PMQTEHLDIV VRKSPENRGL LRQVKRIAAS ESFRHALESM PGLSCGRLGA VRYES
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