Gene Shel_01980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_01980 
Symbol 
ID8394090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp246975 
End bp247460 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content60% 
IMG OID644984970 
Productacetolactate synthase, small subunit 
Protein accessionYP_003142617 
Protein GI257062945 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000298092 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACA TTCTTTCCGT ACTTGTCGAG AACAAGGCCG GCGTGCTGTC CCGTGTCGTG 
GGGCTCATCA CGCGGCGTGG CTTCAACATC CAGTCGCTGA CCGTGGCGCC CACCGAGGAC
CCCACGGTGT CACGCATGAC CATCATTCTG AACTGCGACG AGGTGGCTTG CGAGCAGATC
GTCAAGCAGC TGCACAAGCT GGTCAGCGTG TATAAGATCA GCAACCTGAC CAACAAGGCG
TCCATCGAGC GCGAGCTGGC GCTGTTCAAG GTGACGGTGC CCGCCGAGAA GCGTGGCGAA
ATCATCGAGA TCGCGAACGT GTTCCGTGCG AAGATCGTCG ACGTGAGCAG GTCGTCCATG
ACCATCGAGG CGACAGGCGA CGAGGACAAG CTGTCGGCCA TCGAGGATTT GCTGCGCGGT
TACGGCATCA AGCAGCTGAC CCGCACAGGT AAGGTGGTCA TGCCCCGCGA CCCTCGCGAA
AGCTAA
 
Protein sequence
MDHILSVLVE NKAGVLSRVV GLITRRGFNI QSLTVAPTED PTVSRMTIIL NCDEVACEQI 
VKQLHKLVSV YKISNLTNKA SIERELALFK VTVPAEKRGE IIEIANVFRA KIVDVSRSSM
TIEATGDEDK LSAIEDLLRG YGIKQLTRTG KVVMPRDPRE S