Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_01980 |
Symbol | |
ID | 8394090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 246975 |
End bp | 247460 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644984970 |
Product | acetolactate synthase, small subunit |
Protein accession | YP_003142617 |
Protein GI | 257062945 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0440] Acetolactate synthase, small (regulatory) subunit |
TIGRFAM ID | [TIGR00119] acetolactate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000298092 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACA TTCTTTCCGT ACTTGTCGAG AACAAGGCCG GCGTGCTGTC CCGTGTCGTG GGGCTCATCA CGCGGCGTGG CTTCAACATC CAGTCGCTGA CCGTGGCGCC CACCGAGGAC CCCACGGTGT CACGCATGAC CATCATTCTG AACTGCGACG AGGTGGCTTG CGAGCAGATC GTCAAGCAGC TGCACAAGCT GGTCAGCGTG TATAAGATCA GCAACCTGAC CAACAAGGCG TCCATCGAGC GCGAGCTGGC GCTGTTCAAG GTGACGGTGC CCGCCGAGAA GCGTGGCGAA ATCATCGAGA TCGCGAACGT GTTCCGTGCG AAGATCGTCG ACGTGAGCAG GTCGTCCATG ACCATCGAGG CGACAGGCGA CGAGGACAAG CTGTCGGCCA TCGAGGATTT GCTGCGCGGT TACGGCATCA AGCAGCTGAC CCGCACAGGT AAGGTGGTCA TGCCCCGCGA CCCTCGCGAA AGCTAA
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Protein sequence | MDHILSVLVE NKAGVLSRVV GLITRRGFNI QSLTVAPTED PTVSRMTIIL NCDEVACEQI VKQLHKLVSV YKISNLTNKA SIERELALFK VTVPAEKRGE IIEIANVFRA KIVDVSRSSM TIEATGDEDK LSAIEDLLRG YGIKQLTRTG KVVMPRDPRE S
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